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Bayesian Modelling of fMRI Time Series

 Pedro Højen-Sørensen, Lars Kai Hansen and Carl Edward Rasmussen
  
 

Abstract:
We present a Hidden Markov Model (HMM) for infering the hidden psychological state (or neural activity) during single trial fMRI activation experiments with blocked task paradigms. Inference is based on Bayesian methodology, using a combination of analytical and a variety of Markov Chain Monte Carlo (MCMC) sampling techniques. The advantage of this method is that detection of short time learning effects between repeated trials is possible since inference is based only on single trial experiments

 
 


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