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The CogNet Library : References Collection
mitecs_logo  The Cognitive Neurosciences IV : Table of Contents: Index
 

A

Abulia, 568, 573

Acetylcholine, 1140

Acetylcholinesterase (AChE), laminar shifts in, 34

Across-stimulus generalization, in auditory training, 357–358

Across-task generalization, in auditory training, 355–357

Actin polymerization, 146–147

Action

 in intention understanding, 635–636

 in learning and learning transfer, 160–161

 object concepts in support of, 1032–1035

Action-based choice, 1081

Action planning

 central nervous system and, 541–543, 547

 hierarchical nature of, 642–644

 motor primitives in, 541–543

Action semantics, 648–650

Actions

 fear, neural basis of, 914–918

 nature of, 906

 in Pavlovian conditioning, 906–909, 914–918

Actual code, 420, 432

Actual decoder, 420, 432

Actual encoder, 420

Ad auctions, 1250–1251

Adaptation

 aftereffects in face recognition, 468

 defined, 436–437

 eye movements and, 517–518

 fMRI, 715

Adaptive control, basal ganglia function and, 375–377

Adolescence

 cognitive development in, 73–82

  cognitive control, 73, 76–77

  current and future directions for research, 81–82

  fluid reasoning, 77–81

  structural brain development, 73–74

  working memory development, 73, 74–76

 stress and, 893

Adoption studies, language impairment, 856

Adulthood, stress and, 893

Affective theory, 1093–1094

Afference, posterior parietal cortex (PPC) and, 600–601

Aggression, violent video games and, 155

Aging process

 aerobic exercise and cognitive processes, 157

 Alzheimer's disease, 147, 270, 1009–1010, 1237

 episodic memory deficits, 753

 relational reasoning and, 1008–1011

Agnosia, 792

Agrammatic aphasia, 808

Agraphia, 799

Akaike information criterion (AIC), 378, 379

Akakievitch, Akakhi, 310

Alexia, 260, 794, 799

Alexithymia, 979

Alhazen, 511, 514

Allelic variation, 89–90

Altered states of consciousness, 1139

Alzheimer's disease, 147, 270, 1009–1010, 1237

American Association of Anatomists, 9

American Sign Language (ASL), 169–170

Amnesia

 in blocking reconsolidation, 694–695

 cue-induced, 693–694

 experimental, 696–697

 future-event simulation and, 752–754

 HM (patient), 656, 659, 675

 learning rewarding nature of sensory states, 592–593

 medial temporal lobe function

  habit learning studies, 679–680

  retrograde amnesia, 684–685

  working memory studies, 678–679

 recovery from, 696–697

 source, 1118

 time-dependent behavioral impairment, 694–695

AMPA (α-amino-3-hydroxy-5-methyl-4-isoxazole proprionate) receptors

 in fear reaction, 912

 synaptic plasticity and, 111–113, 118–119

AMPAR endocytosis, 101

Amygdala

 context effects and, 935–942

  context conditioning, 939–940

  experimental context, 941–942

  facial expression, 935–939

  fMRI activation to specific stimuli, 936–937, 941–942

 and domain-specific neural circuitry, 1036–1038

 in emotion regulation, 966

  nonconscious processing of emotion, 1186

  social cognition, 1185

 in fear response, 1095–1096

  conditioned fear actions, 914–918

  conditioned fear reactions, 891–896, 911–913, 930

  infant, 891–896

  parallel processing, 913–914

 memory for visual details of emotional stimuli, 726–727

 modulation of hippocampal consolidation, 729–730

 moral judgment and, 988, 989–990

 organization of, 909–911

 overview, 1095–1097

 in processing emotional information, 928–929, 931, 932

  fMRI activation to specific stimuli, 936–937, 941, 942

  imaging genetics studies, 947–948

 in retrieval of emotional memories, 731–733

 in self-regulation, 957

 in threat detection, 958

 valuation in decision making, 1097

Analogical reasoning, 78, 79, 1008, 1010, 1012–1013

Anger, facial expression and amygdala response, 935

Animal studies. See Birds; Cats; Comparative approach; Ferrets; Fish; Frogs; Monkeys; Neural populations in primate cortex; Rodents

Anisomycin, 698

Anisotropy, 1127–1128

Anomia, 260

Anoxia, 1128–1130

Anterior area (AI), empathy and, 975–982

Anterior cingulate cortex (ACC)

 in conditioned fear reactions, 917, 918

 conflict-control model, 252–257

 in decision making, 1023–1027

 in emotion regulation, 963, 964, 965–970

 empathy and, 975–981

 moral judgment and, 988–991, 992, 993–994

 regulation of control, 709

 reward/value signals in limbic system, 228

 in threat detection, 957–958

Anterior inferior parietal area (AIP), mirror neuron system and, 626–633, 634–635

Anterior intraparietal sulcus (aIPS), goal representation and, 644–645, 647

Anterior olfactory nucleus, 326

Anterior rostral MFC, 1026–1027

Anterior temporal lobes (ATL), in semantic cognition, 1061–1064

Anterograde alteration, of synaptic plasticity, 114–116

Anticipation, 962

 anticipatory signals, 219–223

 movement intention and, 599–601

Antidepictive theories, 1243

Antisocial personality disorder (APD), moral judgment and, 988

Aphasia, 148, 259–260, 1033, 1236

 double dissociation in processing, 767–768, 780, 781

 following stroke, 259–260, 810

 morphological deficits in, 779, 780

 phonological processing in, 767–768

 semantic, 1063–1064

 syntactic deficits and, 808–813

Apoptosis (programmed cell death), cross-species comparisons of cortical development, 16

Apperceptive agnosia, 792

Appetitive conditioning research, 914

Apraxia, 599, 648–649

 conceptual, 649

 ideomotor, 649

Aquatic cetaceans, in evolutionary biology, 52

Arcuate fasciculus (AF), connectivity studies, 57–58, 261–262, 263

Areal domain, neocortical development, 7, 18–19

Aristotelian philosophy, 49

Aristotle, 1116

Arousal

 in learning and learning transfer, 161

 states of consciousness and, 1139–1140

Artificial grammar learning, 880

Asperger syndrome, empathy and, 979

ASPM (abnormal spindlelike microcephaly associated), 59

Assessment. See names of specific assessment instruments

Assimilation, in color vision, 387–388

Association studies

 basal ganglia function and, 576

 nature of, 856

Associativity

 in conceptual representations, 1032

 in memory formation, 113–114, 119, 121–122

 in valuation process, 1087

Asynchrony detection, in relative-learning tasks, 359

Ataxia, 603

Athletic domain

 aging process and, 157

 complex learning environments, 156–158

 experience-dependent learning, 155, 157

Atonia, 1139

Attachment, infant

 fear learning and, 891–896

 maternal separation/deprivation in, 895

 nature of, 889–890

 neonatal handling, 895–896

 neural circuitry and, 890–891

 odor learning in, 889–890

 rearing environment alteration, 895

Attention. See also Cognitive (executive) control; Selective attention; Visual attention

 attention training for children, 173–175, 176

 attentional control processes, 185–186, 251–252

 basal ganglia function and, 573–575

 behavioral phenomena of, 189–200

  attentional bottleneck, 282–283

  consciousness as, 199–200

  control of attention, 198–199

  feature binding, 197–198, 274–276

  focused versus distributed attention, 199

  limits on attention, 189–191

  in perceptual processing, 926–928

  selection process, 191–193

  timing, 193–197

 consciousness versus, 199–200, 1141–1143

 control of, 186, 198–199

  integrating with conflict detection, 251–257

  Sylvian fissure, 186, 263–264

 defining, 185, 219

 effect of emotion on allocation of, 726–727

 emotion and, 925–932

  automaticity, 929–931

  behavioral effects on perception, 926–928

  cultural factors, 931–932

  current behavior goals, 932

  neural circuits underlying attention, 928–929

  neural processing in perception, 925–926

  personality factors, 931–932

 event-related potentials (ERPs) in, 170, 176, 186, 193, 196–197, 199, 254–255

 feedback in visual, 1165–1175

 focused versus distributed, 199

 Hillyard principle, 170

 limits of, 189–191

  behavioral coherence, 191

  disappearance of, 191

  general resources, 190

  structural interference, 189–190

 method of selection, 192–193

  changes of tuning or selectivity, 193

  facilitation, 192–193

  inhibition, 193

 microcircuitry of, 186

 orientation of spatial, 795–796

 plasticity in development of, 170–173

 priming and, 196, 197, 199

 stages of, 193–197

  attentional blink, 196, 197, 199, 1153, 1209

  early versus late, 193–197

  explicit processing and, 196, 197

  implicit processing and, 195–197

  psychological refractory period, 194, 195

  reverse hierarchy theory (Hochstein and Ahissar), 194

 top-down control signals, 186–187, 211–212, 213–214, 220

 video games and, 157

Attention-deficit/hyperactivity disorder (ADHD), 82, 147, 176, 865

 basal ganglia function and, 568, 574

Attention Network Test (ANT), 192

Attentional blink, 196, 197, 199, 1153, 1209

Attentional bottleneck, 282–283

Attentional control signals. See also Cognitive (executive) control

 conflict and, 252–253

 nature of, 251

Attentional dyslexia, 797

Attentional load theory, 206–207

Attentional processing, in selective attention, 293–298

 feature-selective modulation of rhythmic synchronization, 297–298

 gamma-band synchronization, 293–295

 inter-areal synchronization, 298–299

 preparatory attentional states, 295

 temporal expectancies of target processing, 296–297

Attractive bias, 531

Attractor networks, 121–123

Auditory cortex

 neuroplasticity in, 147, 167–169

 in perceptual learning, 132–133, 353–363

 peripheral auditory attention, 170–171

 rewiring vision into auditory pathway, 95–98, 131, 166–167

 visual deprivation and auditory development, 167–169, 321

Auditory filter, 345

Auditory masking, 343–351

 energetic, 344–345, 349, 351

 informational, 345–351

  described, 345–348

  simultaneous multitone maskers and, 345–348

  speech recognition process, 348–351

 perceptual, 348–349

 simultaneous multitone maskers, 345–348

Auditory-motor integration networks, verbal working memory in, 771

Auditory pathway, rewiring vision into, 95–98, 131, 166–167

Auditory processing, 132–133, 353–363

 characteristics of, 358–362

  across-task generalization, 355–357

  learning on trained condition, 354–355

 in fear conditioning, 913

 neural processes in

  described, 353–358

  neural underpinnings of perceptual learning, 362–363

 object analysis, 367–380

  concept of auditory object, 367–368

  fMRI studies in, 371–379

  manipulation of natural stimuli, 368–370

  natural stimuli, 368–370

  stimuli based on sequence of objects, 370–371

  synthetic stimuli for, 370

Autism, 147, 166

 empathy and, 979

 motor cognition and, 636–638

 phenomenal consciousness in, 1118

Autism spectrum disorder (ASD), early language acquisition, 845–847, 848

Autobiographical memory, 684–686, 726, 731, 753

Autobiographical Memory Interview (AMI), 686, 687, 753

Automaticity, of emotional processing, 929–932

Autosomal dominant retinitis pigmentosa (adRP), 388–389

Avians. See Birds

Avoidance conditioning, 116, 907–909

Awareness. See also Consciousness

 declarative memory and, 686–687

 detecting, following brain injury, 1125–1127

 self-awareness, 954–955

 visual. See Visual awareness

Axel, Richard, 324–325

B

Back-propagation of error, 1050

Balanced Emotional Empathy Scale (BEES), 978–979

Balint's syndrome

 characteristics of, 269, 270–273, 798

 following stroke, 198

 loss of feature-based attention, 271–272

 loss of object-based attention, 270–271

Bartlett, Frederic, 751

Basal ganglia

 in cognition, 565–579

  anatomical perspectives, 565–568

  chunking of action repertoires, 577–579

  clinical perspectives, 568

  hypotheses of function, 568–577

 functions, 553–554, 568–577, 709

 pathology of, 560–561

 virus tracing studies, 553–561

Baseball, experience-based learning in, 155, 157

Basic fibroblast growth factor (bFGF), 30

Basketball, complex learning environments, 156–157

Basolateral complex (BLA), in fear learning/conditioning, 911, 913, 915–917, 919

Basolateral nuclei, 911

Basomedial nuclei, 911

Bayesian information criterion (BIC), 378, 379, 380

Bayesian statistics, 396–406

 basic ideas, 396–397

 color constancy and, 398–401

 cone mosaic and, 401–404

 empirical estimation, 529

 ideal Bayesian observer, 420–421, 530

 inference and, 159

  duality with optimal control, 614–622

 linear estimator, 528

 maximum a posteriori (MAP) estimator, 528–529, 532

 models in, 397–398, 404–406

 optimal estimation and, 527–529

 perceptual Bayesianism, 530–531

 quadratic error (least squares) solution, 527–528

 unsupervised regression, 529

Behavioral measures

 of attention, 189–200

  attentional bottleneck, 282–283

  consciousness as, 199–200

  control of attention, 198–199

  feature binding, 197–198, 274–276

  focused versus distributed attention, 199

  limits on attention, 189–191

  selection process, 191–193

  timing, 193–197

 of facial recognition, 467–470, 473–474, 477–478

 in goal-directed choice

  multiple behavioral controllers, 1078–1079

  simple binary stimulus, 1076–1077, 1079–1081

 of multisensory integration, 505–506

Belief networks, 614–621

Belief propagation, 621

Bellman equation, 617

Bereitschaftspotential (BP), spontaneous motor initiation, 1191

Beta-band synchronization, 298–299

Biased competition theory, 198–199, 705–706

Bibliometric studies, 1221–1222

Bilingualism, infant, 848–849

Bimanual movements, goal representation in, 645–647

Binocular correlation, in depth perception, 489–490

Binocular disparity, in depth perception, 483, 484–489

Binocular rivalry, 1143, 1156, 1170–1176, 1209

Biolinguistics, 875–876

Biological theory of consciousness

 described, 1112–1113

 explanatory gap and, 1114

 self in, 1118–1119

Birds

 cross-species comparisons of neocortical development, 8

 mechanisms underlying vocal learning, 878–879

Blind spots, filling-in, 436–437

Blindness

 attention and, 170–171

 consciousness as requirement for exclusion, 1194–1195

 inattentional, 195–196

 metacognitive masking and, 1198, 1199

 nonconscious processing of emotion, 1186

 sensory substitution and, 167–169, 321

 visual area involvement in nonvisual tasks, 168–169

Bliss, Tim, 109–111

Blue cone monochromacy, 390

BOLD fMRI. See under Functional magnetic resonance imaging (fMRI)

Bottom-up influences, in selective attention, 212–214

 attentional processing, 298–299

 relation to top-down influences, 213–214

 scene segmentation, 212–213

 visual salience, 212

Boulder Committee model, 10, 11, 12

Bound functional morphemes (inflections), 777

Boundary processing

 in controlling spread, 439–441

 in object recognition process, 455–460, 463–464

 in surface perception, 436–437, 439–441, 442–443

Brachium of the IC (BIC), 95

Bradykinesia, 571, 573

Bradyphrenia, 573

Brain damage. See also Lesion studies; Stroke

 moral judgment and, 987–988

 parahippocampal region, 659–660

 recovery of consciousness after brain injury, 1123–1134

  central thalamic deep-brain stimulation, 1131–1134

  circuit mechanisms underlying forebrain function, 1128–1130

  detecting awareness in absence of behavioral responsiveness, 1125–1127

  disorders of consciousness overview, 1124–1125

  functional recovery and white matter structural changes, 1127–1128

  future directions, 1133–1134

 striatal, 593–594

 virtual, 1005

Brain-derived neurotrophic factor (BDNF), 100, 145, 146–147

Brain specialization, 53–61

 comparative genomics, 58–61

 comparative histology, 54–55

 comparative neuroimaging, 55–58

Brain surgery, plasticity as opportunity for intervention, 148

Brain volume, 746

BrdU, as marker for DNA synthesis, 8

Broadbent, W. H., 1032–1033

Broadly congruent, 629

Broca, Paul, 1235

Broca's area

 aphasia and, 741, 773, 808, 809, 811, 1236, 1237

 comparative neuroimaging, 57

 connectivity studies, 261

 in early language acquisition, 847–848

 in human brain specialization, 53

 morphological processing and, 782

 neuronal circuitry of frontal lobe, 39

 in semantic unification network, 831

Brodmann's area, 1021, 1236

Buck, Linda, 324–325

Burst neurons, 1089–1090

Bush, George H. W., 1260

C

Cajal-Retzius cells, 33, 37, 42

Calbindin, in human brain specialization, 55, 56

Calcium

 cross-species comparisons of cortical development, 14

 in long-term potentiation (LTP) process, 146

 in postsynaptic terminal, 111, 112

Calcium/calmodulin-dependent kinase II (CaMKII), 116

Calretinin, in comparative histology, 54

Cancer, 858

Capacity for culture, 875

Caring, moral judgment and, 988–989

Cascade model, 1021–1023

 described, 1021–1022

Caspases, cross-species comparisons of cortical development, 16

Cat-301, 55, 56

Cats

 sensory substitution in, 321

 visual cortex

  formation of eye-specific inputs, 68

  temporal code in perceptual learning, 136

Caud, caudate nucleus, neuronal circuitry of frontal lobe, 31

Causal manipulation, in depth perception, 492–493

Cell divisions, cross-species comparisons of cortical development, 17

Cellular (synaptic) consolidation, 692

Central and anterior IT (CIT/AIT) neural tuning, 461–465

Central nervous system (CNS)

 mechanical basis for compositionality, 547–548

 planning and, 541–543, 547

Central pattern generators (CPGs), 545–546

Centrosome, cross-species comparisons of cortical development, 14

Cerebellum

 functions, 553–554

 in motor learning and control

  construction of internal models, 592

  predicting sensory consequences of motor commands, 591–592

 pathology of, 560–561, 592

 virus tracing studies, 553–561

Cerebral cortex

 cross-species size comparisons, 15–17

 development of, 314–316

 first appearance, 315–316

 hierarchical function, 314–316

 symmetry and, 316–317

 virus tracing studies, 559

Cetaceans

 comparative histology, 55

 in evolutionary biology, 52

Childhood. See also Developmental stages

 attention training in, 173–175

 attentional modulation in, 171

 autism in, 147, 166, 636–638, 979, 1118

 cognitive development in, 73–82

  cognitive control, 73, 76–77

  current and future directions for research, 81–82

  fluid reasoning, 77–81

  structural brain development, 73–74

  working memory development, 73, 74–76

 differential development and, 1048

 early childhood stage

  defined, 30

  neuronal circuitry of frontal lobe, 30, 31, 41–44

 early language acquisition, 837–851

  infant lexicon, 843–844

  neuroscience-based measures, 837–839

  phonetic learning, 839–841

  second-language learning, 842

  sentence processing, 844–845

  word learning, 842–843

 face recognition in, 473–478

 phenomenal consciousness during, 1117–1118

 relational reasoning during, 1005

Chimpanzees. See Monkeys

Choice. See Consciousness, volition and function of; Decision making; Goal-directed choice

Choice probabilities (CP), in depth perception, 490–492

Chomsky, Noam, 806, 807–808, 837, 855

Chondroitin-sulfate proteoglycans (CSPGs), in ocular dominance plasticity, 101

Chorea, 572

Chronic neuropathic pain syndromes, 147

Chunking, basal ganglia function and, 577–579

Cinematographic vision, 1145

Class I major histocompatibility complex (Class I MHC), 147

Closed loop control, 615–617

CNTNAP2, 862, 863–864

Coarse depth discrimination, 489–493

Cognitive (executive) control

 basal ganglia in, 567

 conflict and, 252–257

 in decision making, 1021

 defined, 705

 development of, 76–77, 82, 705–709, 714–719, 1019–1027

 in emotion regulation, 969

 functions within, 76

 memory and, 705–720

  interactions, 709–714

  mnemonic prediction, 714–719

  mnemonic suppression, 714–719

  prefrontal cortex in, 76–77, 82, 705–709, 714–719

  theoretical basis, 705–709

 nature of, 73

 reliance on, 1247

 types, 1021

Cognitive evolution. See Evolutionary biology

Cognitive function

 activations in, 1067–1068

 assumptions of pure insertion, 1067–1068

 basal ganglia in, 565–579

  anatomical perspectives, 565–568

  chunking of action repertoires, 577–579

  clinical perspectives, 568

  hypotheses of function, 568–577

 cost of intrinsic activity, 1068–1070

 cross-species comparisons of neocortical development, 7–8, 20, 22–23

 current and future directions for research, 81–82

 fluid reasoning development, 77–81

 in human brain specialization, 53–61

 imagery debate, 1241–1245

 levels of

  algorithmic, 807–810

  neural, 810–813

  representational, 805–807

 neuronal circuitry of frontal lobe, 29–44

 organization of intrinsic activity, 1070–1071

 specificity of learning, 154, 156

 stages of, 29–44

 structural brain development, 73–74

 theory of cognition, 1241–1243

  competence versus processing, 1241–1243

  relevance of the brain, 1243–1244

 working memory development, 74–76, 82

Cognitive neuroscience

 ethics and, 1260

 imagery debate, 1241–1245

 landscape of, 1255–1261

  integrating, 1258–1259

  methodology, 1255–1256

  society and, 1259–1261

  theory, 1256–1258

 of language, 1235–1239

 mapping, 1221–1234

  bibliometric studies, 1221–1222

  journal citation maps, 1222–1230

  topic maps, 1230–1233

 origins of, 1221, 1248, 1255

 purpose of, 1247

 as term, 1221

Cognitive perspective taking. See Empathy

Color blindness, 389–390

Color vision, 383–392

 Bayesian approaches to, 396–406

  basic ideas, 396–397

  color constancy and, 399–401

  cone mosaic and, 401–404

  models in, 397–398, 404–406

 color constancy, 398–401

 deficient, 388–392

  blue cone monochromacy, 390

  red/green deficiency, 389–390

  rod monochromacy, 390–392

  tritanopia, 388–389

 fundamentals of, 395

 normal, 383–388

  L cone mosaic, 386–388

  M cone mosaic, 386–388

  S cone mosaic, 384–386

 object concepts and, 1034–1035

 visual plasticity and, 166, 167

Coma, 1124

Communication. See also Language processing

 attention and stages of, 193–197

Comparative approach

 differentiation level in, 52–53

 to human brain specialization

  comparative genomics, 58–61

  comparative histology, 54–55

  comparative neuroimaging, 55–58

 model-animal approach versus, 52–53

 nature of, 856–857

 to neocortical development, 7–23

  cognitive processing, 7–8, 20, 22–23

  cortical architecture, 7

  cortical size determinants, 15–17

  neuronal cell migration, 10–14

  onset of neurogenesis, 8

  origins of cortical neurons, 8–9

  protomap hypothesis, 18–19

  radial unit hypothesis, 14–15

  span of neurogenesis, 8

  stages of cortical development in humans, 20–22

  synaptic connections, 7, 19–20

  transient embryonic zones, 9–10

 to parahippocampal region

  boundaries and nomenclature, 660–662

  connectivity in, 662–669

  damage, 659–660

  defined, 660

  entorhinal cortex, 659–660, 661, 662, 667–671

  monkeys versus rats, 659–671

  parahippocampal cortex, 659, 661, 665–666

  perirhinal cortex, 659, 660–665

  postrhinal cortex, 663, 666–667, 670

Competence, processing versus, 1241–1242

Competition

 control pathways in basal ganglia, 569–573

 in memory tasks, interference, 76, 710–719

 in selective attention, 186

  biased competition theory, 198–199, 705–706

  bottom-up influences on, 212–214

  neural basis of competition, 210–211

  observing sensory biases, 219–223

  top-down influences on, 211–212, 213–214

Complex genetic diseases, 858

Complex learning environments, 156–158

Complexes, in integrated information theory (IIT), 1205, 1207

Composite effect, in face recognition, 468

Compositionality, motor system, 543, 547–548

Concentration, 185. See also Attention

 nature of, 185

Concepts

 conceptual dualism, 1115

 defined, 1115

Conceptual priming, 715–719

Conceptual representation, 1031–1042

 neural foundations, 1032–1042

  acting, 1032–1035

  anterior regions of temporal lobe, 1040–1041

  domain-specific neural circuitry, 1035–1041

  feeling, 1032–1035

  perceiving, 1032–1035

  visual processing, 1032

 object maps and, 1031–1032

 property information, 1035–1038

Conceptual self, 954

Conditioned motivation, 909, 915–918

Conditioned response (CR)

 conditioned fear reactions, 891–896, 911–918

  parallel processing, 913–914

  serial processing, 911–913, 914

 in context conditioning, 939–940

 in decision making, 1095–1096

 nature of, 906–909

Conditioned stimulus (CS)

 in context conditioning, 939–940

 in decision making, 1095–1096

 nature of, 906–909

Configuration space, 542–543

Conflict

 attentional control systems and, 252–253

 brain networks for cognitive processing, 253–255

 cognitive control and, 252–257

Conflict adaptation, 1024–1025

Connectionism, 158–159

Connectivity

 anatomical basis for, 437–438

 anticipatory signals

  defined, 219–223

  dorsal frontoparietal attention network, 219–223

  for spatial attention, 222–223

 auditory object analysis, 375–379

 cascade model and, 1023

 functional connectivity

  defined, 219–223

  dorsal frontoparietal attention network, 219–223

  by fMRI, 221

 importance of, 1252

 neuroimaging studies of, 55–58

 in parahippocampal region, 662–669

 perisylvian white matter, 260–262

 statistical connectivity theory, 411–415

  cortical maps, 413–414

  described, 411–413

  testing, 414–415

 surface perception and, 437–438

Consciousness. See also Awareness

 attention versus, 199–200, 1142–1143. See also Attention; Visual attention

 coma, 1124

 defined, 1137, 1181

 development of, 316

 emotion and, 1181–1188

  conscious experience of emotion, 1181–1185

  nonconscious processing of emotion, 1185–1188

 in evolutionary biology, 1138–1139

 locked-in state (LIS), 1124–1125

 minimally conscious state (MCS), 1123, 1124, 1125–1127, 1130–1134, 1139

 nature of, 752, 1137

 neurobiology of, 1137–1147

  arousal and states of, 1139–1140

  attention versus, 1142–1143

  forward versus feedback projections, 1145–1146

  free will and, 1138

  interaction versus, 1141

  neuronal basis of perceptual illusions, 1143–1145

  neuronal circuitry of frontal lobe, 41

  neuronal correlates, 1140–1141

  neuronal correlation of consciousness (NCC), 1140–1141, 1143–1145, 1172–1176

  in other species, 1138–1139

  quantum mechanics and, 1141

  self-consciousness versus, 1141–1142

 phenomena included in, 1137–1138

 recovery after brain injury, 1123–1134

  central thalamic deep-brain stimulation, 1131–1134

  circuit mechanisms underlying forebrain function, 1128–1130

  detecting awareness in absence of behavioral responsiveness, 1125–1127

  disorders of consciousness overview, 1124–1125

  functional recovery and white matter structural changes, 1127–1128

  future directions, 1133–1134

 separation of cognition and, 1112

 specificity of, 1209–1212

 theories of, 1111–1120, 1201–1216

  biological, 1112–1113, 1114, 1118–1119

  consciousness-of, 1115–1116, 1182

  determining quality of consciousness, 1209–1217

  determining quantity of consciousness, 1201–1209, 1210–1211

  dualism and, 1114–1115

  explanatory gap and, 113–1115

  global workspace, 1111–1112, 1113, 1114, 1119

  higher order thought (HOT), 1111, 1113, 1114, 1115–1118, 1119

  machine consciousness and, 1119–1120

  nature of concept, 1115

  self and, 1118–1119

 vegetative state (VS), 1124

 visual awareness, 1151–1161

  brain activity and, 1152

  causal factors and pathologies of vision, 1158–1159

  characterizing unconscious homunculus, 1152–1154

  empirical ad theoretical integration, 1159–1160

  impact of, 1155–1158

  measuring, 1151–1152

  unconscious vision and multivariate pattern analysis, 1154–1155

 volition and function of, 1191–1199

  conscious veto, 1193–1194

  exclusion, 1194–1195

  inhibition, 1194–1195

  spontaneous motor initiation, 1191–1193

  top-down cognitive control, 1195–1197

  true function of consciousness, 1197–1199

Consciousness-of, nature of, 1115–1116, 1182

Consolidation theory, 692–693. See also Reconsolidation

 memory and

  emotional effects on hippocampus, 729–730

  sleep deprivation, 730–731

Constructive memory, 751–759

 core network in, 754–756, 757–759

 future event simulation, 752–754, 757–759

 imagining future events, 752–757

 past versus future events, 756–757

Consummatory responses, 914

Context

 amygdala processing and, 935–942

  context conditioning, 939–940

  experimental context, 941–942

  facial expression, 935–939

  fMRI activation to specific stimuli, 936–937, 941–942

 in cognitive neuroscience, 1259

 in decision making, 1019–1020

 in intention understanding, 635–636

 in qualia space, 1212–1213, 1215

Contextual control, 1021

Contour integration, 130–131

Contour orientation, in discriminative learning, 133–134, 135, 136

Control. See also Cognitive (executive) control

 interference, 1006–1007, 1013–1014

 in semantic unification framework, 819

 similarity with inference, 613–614

Convergent evolution, 876–877

Cooperativity, in memory formation, 113–114

Coordinate response measure (CRM), 349

Coordinate transformation, 541–543

Cornu ammonis 3 (CA3), 111

Corona radiata fibers, neuronal circuitry of frontal lobe, 36

Corpus callosum (CC), neuronal circuitry of frontal lobe, 31, 37, 39–40

Correlation

 cortical, 316–318

 grandmother cells, 316–318

 temporal correlations in population response, 426–427

Cortical afferents

 monkey entorhinal cortex, 667

 monkey parahippocampal cortex, 665–666

 monkey perirhinal cortex, 662–663

 rodent entorhinal cortex, 667–669

 rodent perirhinal cortex, 665, 666–667

Cortical architecture

 cross-species comparisons of neocortical development, 7, 9–16, 19

 designation of permanent cortical layers (I-VI), 31

 future perspectives, 1247–1253

  comprehensive theory of brain function, 1249–1250

  modular hypothesis, 1247–1249

  other complex systems, 1250–1251

 model for modal texture filling-in, 442–447

 stages of development, neuronal circuitry of frontal lobe, 29–44

 of visual cortex, 130

Cortical column unit (CCU), 442

Cortical magnification factor (CMF), primate cortex, 422–423

Cortical mapping. See also Retinotopic projections/maps

 human brain specialization, 53–54

 motor cortex, 142–146

 neuronal circuitry of frontal lobe, 30–31

 protomap hypothesis, 18–19, 30–31

 statistical connectivity and, 413–414

Cortical plate (CP)

 cross-species comparisons of cortical development, 11, 13, 16–18, 20, 21

 neuronal circuitry of frontal lobe, 29–32, 33–34, 35, 36, 43

Cortical projection neurons

 cross-species comparisons of neocortical development, 8, 22–23

 neuronal circuitry of frontal lobe, 33

Cortical thickness, 73–74

Cortico-cortical fibers (CC)

 cross-species comparisons of cortical development, 13

 neuronal circuitry of frontal lobe, 29, 32, 37, 39–40, 43–44

Corticogenesis

 designation of permanent cortical layers (I-VI), 31

 neuronal circuitry of human prefrontal cortex, 29–44

 stages of

  cross-species comparisons, 12, 13, 16

  cytoarchitectonic layers, 31

  early childhood, 30, 31, 41–44

  early fetal period, 29–32

  early preterm period, 30, 31, 33–36

  embryonic period, 30, 31

  human, 20–22, 29–44

  infancy, 30, 31, 39–41

  late fetal period, 30, 31, 32–33

  late preterm period, 30, 31, 36–37

  list of stages, 30

  midfetal period, 30, 31, 32–33

  neonatal period, 30, 37–39, 42

  neural circuitry of prefrontal cortex, 29–44

Corticopontine, comparative neuroimaging, 57

Corticosterone (CORT), in infant fear learning, 893–896

Craik O’Brian Cornsweet (COC) stimulus, 438–441

Craniotopic maps, 519–521

CREB phosphorylation (pCREB), in attachment learning, 891, 893

Critical (sensitive) periods

 for face recognition, 472, 479

 for language development, 841, 850

 for visual plasticity, 100, 130

Crowding task, video games and, 157, 158

Crying, in pathological laughter and crying (PLC), 1184

Crystallized reasoning, 78

Cue-induced amnesia, 693–694

Cue reliability, in multisensory integration, 506–507

Cultural factors, in processing of emotional information, 931–932

CYCLE, 809

Cytoskeleton

 cross-species comparisons of cortical development, 14

 neuroplasticity and, 146–147

D

Damasio, Antonio, 1183–1184

Darwin, Charles, 49–52, 873, 1242

Deafness

 American Sign Language (ASL), 169–170

 attention and, 170

 motor detection and, 166, 167

Decision making

 defined, 1019

 emotion regulation in, 966–968, 1093–1100, 1187–1188

 in neuroeconomics, 1075

  computational basis, 1079–1081

  emotion and, 1098–1100

  initial investigations, 1098–1100

  multiple behavior controllers, 1078–1079

  neurobiological basis, 1079–1083, 1095–1100

  simple binary stimulus choice, 1076–1077, 1079–1083

  valuation process, 1085–1091

 prefrontal executive function in, 1019–1027

  action selection, 1021

  cascade model, 1021–1023

  hierarchical control, 1021

  medial frontal cortex, 1023–1027

  motivational control, 1023–1027

Declarative memory

 awareness and, 686–687

 emotional modulation of, 725–733

  consolidation processes, 729–731

  during encoding, 725–729

  future directions, 733

  during retrieval, 731–733

 medial temporal lobe function, 675, 679–683, 686–687

 recognition memory, 680–683

 sleep deprivation and, 730

Declarative/procedural hypothesis, in morphological processing, 780–782

Decoding

 dynamic state of posterior parietal cortex (PPC), 607–609

 neural populations in primate cortex

  different cortical areas, 430

  different tasks, 430–431

  mechanisms, 427–429

  response, 430

 in reading process, 797

Decorrelation, spatial, 427

Deep-brain electrical stimulation (DBS), following severe brain injury, 1131–1134

Deep homology

 conservation of developmental pathways, 876–877

 defined, 873–874

 demonstration of, 879

 discovery of, 877–878

 evolutionary innovation in cognition and language, 877–878

Default node network, 1068, 1069

Defense conditioning, 907

Dementia

 basal ganglia functions and, 568

 fluid reasoning in, 79

 frontotemporal dementia (FTD), 79

 semantic, 1008, 1047, 1053–1061

Dendrites, neuronal circuitry of frontal lobe, 36–37, 40–41

Depictive theories, 1243

Depression, 147

Depth perception

 neuronal versus behavioral sensitivity, 490

 three-dimensional structural coding hypothesis, 460–463

 visual area MT in, 483–496

  binocular disparity processing, 483, 484–489

  coarse and fine discrimination, 489–493

  motion parallax, 484, 493–495

Depth sign discrimination index (DSDI), 495

Developmental biology

 critical (sensitive) periods, 100, 130, 472, 479, 841, 850

 defined, 876

 marriage with evolutionary biology, 876

 neural epigenesis, 876

Developmental stages

 cross-species comparisons, 12, 13, 16

 early childhood, 30, 31, 41–44

 early fetal period, 29–32, 42

 early preterm period, 30, 31, 33–36, 42, 43

 infancy, 30, 31, 39–41, 470–473

 language acquisition

  neural basis, 837–851

  visual processing of printed words, 791–794

 late fetal period, 30, 31, 32–33, 42

 late preterm period, 30, 31, 36–37, 42, 43

 list of, 30

 midfetal period, 30, 31, 32–33, 34

 neonatal period, 30, 37–39, 42

 neuronal circuitry of prefrontal lobe, 29–44

 for visual plasticity

  critical periods, 100, 130

  early development, 129–130

  late maturation, 130–131

Developmental verbal dyspraxia, 860–863

Diabetes, 858

Dieting, 957

Different band noise, 350

Different band sentence, 350

Differentiation level, 52–53

Diffusion-tensor and diffusion spectrum imaging (DTI/DSI), dense perisylvian white matter connectivity, 260–262, 263

Diffusion-tensor imaging (DTI)

 of changes in interregional connectivity, 74

 in comparative neuroimaging, 55–58

 white matter structural changes following brain injury, 1127–1128

Direct realism, 847

Disconnection syndrome, 263–264, 269

Discourse models, in semantic unification framework, 822–824

Discriminative learning, 133–134

Disproportionate inversion effect, in face recognition, 468

Dissociation

 consciousness and, 1142–1143

 double dissociation in processing aphasia, 767–768, 780, 781

 neuroanatomical dissociation hypothesis, 783–784

 nonconscious processing of emotion, 1185–1188

 and true function of consciousness, 1197–1199

Distinctiveness effects, in face recognition, 468

Distraction, 962–964, 969

 anticipation in, 962

 interference in, 962–964

Distributed algorithmic mechanism design (DAMD), 1251, 1252

Distributed attention, focused attention versus, 199

Domain-specific neural circuitry, 1035–1041

 activity in, 1038–1040

 property information in, 1035–1038

Dopamine

 in basal ganglia function, 567, 571–572

 in valuation process, 1087–1089

 video games and, 161

Dorsal anterior cingulate (dACC), in cognitive control development, 77, 78, 254–255

Dorsal frontoparietal attention network. See Frontoparietal attention network, dorsal

Dorsal lateral geniculate (dLGN), 67–71

 formation of eye-specific inputs, 68–70, 94

Dorsal visual pathway, 794–799

 neuroplasticity of, 166–167, 168

 reading process and

  interfacing with verbal system, 798–799

  orientation of attention, 795–796

  parts of words, 797–798

  pathology, 795–796

  serial decoding, 797–798

  single word selection, 796–797

 timing of attention and, 193–194

 visual awareness and, 1159–1160

Dorsolateral prefrontal cortex (DLPFC)

 conflict-control model and, 252

 development of, 74–76, 77, 79, 80, 705, 706, 707

 in emotion regulation, 963, 966–967

 memory and, 705, 706, 707, 719, 932

 moral judgment and, 988, 992–994

 in processing of emotional information, 932

 in simple binary stimulus-choice paradigm, 1081–1083

Double-bouquet interneurons

 cross-species comparisons of cortical development, 22

 neuronal circuitry of frontal lobe, 41

Double Cortex, 14

Dragon software, 332–333

Driver, in relational reasoning, 1008

Dual-process morality, 991–993

Dual-task paradigm

 attention versus consciousness, 1143

 blood oxygen level dependent (BOLD) response, 1145

Dual task performance, as cognitive control function, 76

Dualism

 conceptual, 1115

 defined, 1114

 explanatory gap in consciousness and, 1114–1115

Dynamic belief networks, 614–621

Dynamic causal model (DCM), effective connectivity of fMRI data, 375–378

Dyslexia, 166, 167, 168. See also Reading process

 attentional, 797

 central, 789

 developmental, 857–859, 863–866

 neglect, 795–796

 peripheral, 789

 spatial, 798

Dyspraxia, 860–863

Dystonia, 565, 572

E

Early childhood stage. See Childhood

Early infancy stage

 defined, 30

 neuronal circuitry of frontal lobe, 30, 31, 39–41

  functional organization, 39–41

  neurogenetic events, 39

  structural organization, 39

Early language acquisition, 837–851

 infant lexicon, 843–844

 neuroscience-based measures, 837–839

 phonetic learning, 839–841

 second-language learning, 842, 848–849

 sentence processing, 844–845

 word learning, 842–843

Early preterm stage

 defined, 30

 laminar shifts in acetylcholinesterase (AChE), 34

 neuronal circuitry of frontal lobe, 30, 31, 33–36, 42, 43

  functional organization, 35–36

  neurogenetic events, 34–35

  structural organization, 33–34

Early Reading Intervention (ERI), 175

Ecological self, 954, 955

EEG/MEG studies

 brain measurement of auditory object analysis, 371, 376

 physiological mechanisms in visual object selection, 229–230

 of semantic unification, 822

Effective information, 1204

Efferent associative pathways, neuronal circuitry of frontal lobe, 37, 43

Egly paradigm, 242

18F-fluorodeoxyglucose (FDG)-PET technique, 57

Elaboration, effects of emotion on, 728

Electroconvulsive shock (ECS), in test of consolidation theory, 693

Electroencephalography (EEG). See also EEG/MEG studies

 early language acquisition, 837–838, 839, 849–850

 empathy and, 982

 neural processing of emotional information, 925–926

 spontaneous motor initiation, 1191

Electromyelography (EMG)

 empathy and, 974–975, 981

 motor cognition in autism, 636–638

 muscle synergies, 544–546

Elliot Smith, Grafton, 51

Embodied cognition, 1032–1035

Embryonic stage

 defined, 30, 31

 formation of visual pathway, 91–92

Emotion. See also Emotion regulation; Empathy; Fear learning/conditioning; Moral judgment; Social cognition

 amygdala in processing. See Amygdala

 attention and, 190, 925–932

  automaticity, 929–931

  behavioral effects on perception, 926–928

  cultural factors, 931–932

  current behavior goals, 932

  neural circuits underlying attention, 928–929

  neural processing in perception, 925–926

  personality factors, 931–932

 consciousness and, 1181–1188

  conscious experience of emotion, 1181–1185

  nonconscious processing of emotion, 1185–1188

 context effects and amygdala, 935–942

  context conditioning, 939–940

  experimental context, 941–942

  facial expressions, 935–939, 941–942

  fMRI activation to specific stimuli, 936–937, 941–942

 feelings versus, 1182. See also Feelings

 imaging genetics and, 945–949

  amygdala reactivity, 947–948

  conceptual basis of research, 945–946

  importance of, 946

  neuroimaging role, 945–946

  principles of imaging genetics, 946

 in modulation of declarative memory, 725–733

  consolidation processes, 729–731

  during encoding, 725–729

  future directions, 733

  during retrieval, 731–733

 object concepts in support of feeling, 1032–1035

 reaction and action, 905–919

  behavioral distinctions, 905–909

  neural basis of fear actions, 914–918

  neural basis of fear reactions, 909–914

 regulation of. See Emotion regulation

 social cognition and, 1184–1185. See also Social cognition

Emotion regulation, 961–970

 in decision making, 966–968, 1093–1100, 1187–1188

  amygdala, 1095–1097

  initial investigations, 1098–1100

  striatum, 1094–1095, 1097

 defined, 961

 distraction, 962–964, 969

 future directions, 969–970

 methodology for study of, 961–962

 neuroimaging research on, 968–970, 1099

 reappraisal, 964–966, 969

 self-regulation, 956–957

Emotional attention, 925

Emotional attention sets, 932

Emotional contagion, 974

Emotional memory, 700, 725

Empathy, 973–982. See also Social cognition

 defined, 973–974

 healthy versus clinical populations, 978–979

 insular involvement, 977–978

 modulation of, 979–981

 moral judgment and, 988–989

 prosocial behavior and, 982

 related concepts, 973–974

 shared networks hypothesis, 974–977

Encoding

 dynamic state of posterior parietal cortex (PPC), 604–607

 emotional influences on, 725–729

 of emotional information, 728

 neural populations in primate cortex, 419–432

  mean response, 422–425

  response variability, 425–427

  theoretical framework, 420–421

  in vivo measurement, 421–422

 in olfaction

  odor, 326–327

  from percept to molecule, 330

  spatial, 327–329

  temporal, 329–330

 temporal

  odor discrimination, 329–330

  perceptual learning, 135–136

 variable nature of episodic memory, 743–744

Encyclopedic knowledge, in conceptual representations, 1032

End-stopped neurons, 314

Endogenous attention, 925, 932

Endpoint coordinates, 541–542

Energetic masking, auditory, 344–345, 349, 351

Entanglement

 consciousness and, 1141

 in qualia space, 1213

Entorhinal cortex, comparative anatomy of, 661, 662, 667–671

Entropy, in integrated information theory (IIT), 1202, 1204

Ephrin-A receptors (EphAs), 70, 92–94, 97, 98

Ephrin-B receptors (EphBs), 92–94

Episodic control, 1021

Episodic memory

 as constructive, 751–759

  future event simulation, 752–754, 757–759

  imagining future events, 752–757

  past versus future events, 756–757

 distribution throughout cerebral cortex, 743–744

 encoding/retrieval studies, 712, 731–733

 individual differences and, 743–747

  neural basis of episodic retrieval, 743

  sources of variability, 744–747

  variable nature of brain regions, 743–744

 parahippocampal region and, 670

 sleep deprivation and, 730

Epithelium, olfactory, 324–325, 327–328

ERP. See Event-related potentials (ERPs)

Error/feedback processing, as cognitive control function, 76

Error signals, in learning and learning transfer, 160

Escape from fear hypothesis (EFF), 907–909, 1096

 amygdala contributions to conditioned reinforcement, 914–917, 1095–1097

 conditioned motivation, 909, 915–917

 described, 907–909

Essential genes, cross-species comparisons of neocortical development, 7–8

Estes, William, 740–741

Estimation. See Optimal estimation

Ethics, of cognitive neuroscience, 1260

Event knowledge, in semantic unification framework, 822–824

Event-related magnetic fields (ERMFs), in analysis of attention development

 feature-based attention, 238–240

 object-based attention, 240–246

 spatial attention, 235–238

Event-related potentials (ERPs)

 in analysis of attention development, 170, 176, 186, 193, 196–197

  biased competition theory, 199

  conflict and attentional control, 254–255

  feature-based attention, 238–240

  object-based attention, 240–246

  spatial attention, 235–238

 in auditory development, 172–173, 175

 basal ganglia function and, 577–578

 early language acquisition, 169–170, 837–838, 839–849

 in emotion regulation, 964

 face recognition and, 469, 472–473, 474–477

 integration of conflict processing and attention, 253–255

 in language development, 169–170

 neural processing of emotional information, 929, 930

 in semantic unification, 820–822, 823, 824–827

 spontaneous motor initiation, 1192

 in vision, 166, 167

Evolutionary biology, 49–53. See also Genetics; Genomics

 cerebral cortex in, 314–316

 consciousness in, 1138–1139

 Darwin and, 49–52

 fear learning in, 892

 human brain specialization, 53–61

 human brain versus other animals, 49–52

 language in, 873–881

  deep homology, 876–878

  evo-devo perspectives, 876

  human cognitive evolution, 874–876

  mechanisms underlying speech and vocal learning, 878–879

  semantics, 875, 879–880

  syntax, 880

 model-animal versus comparative approaches, 52–53

 time periods, 51

Evolutionary developmental biology (evo-devo), 876

Excitatory neurons, cross-species comparisons of cortical development, 22–23

Excitatory projection cells, cross-species comparisons of neocortical development, 7, 22–23

Exclusion

 conscious, 1194–1195

 noise, 171, 173

Executive control. See Cognitive (executive) control

Exogenous attention, 925, 932

Experience

 in consciousness, 1137–1138

 giving shape to, in qualia space, 1212–1213

 in isolation, face recognition and, 469

Experience-dependent learning, 154–155, 161, 167

Experimental context

 instructions, impact of, 941–942

 neutral position, 941

 static versus dynamic, 941

Explanatory gap in consciousness, 1113–1115

 described, 1113–1114

 dualism and, 1114–1115

Expressed knowledge, in conceptual representations, 1032

Expression studies, nature of, 857

Extracellular signal-regulated kinase-mitogen-activated protein kinase (ERK-MRPK), 696

Extrastriate body areas (EBA), neural processing of emotional information, 926

Extreme capsule (EmC), 261

Eye movements

 in attentional selection, 290

 eyeblink conditioning studies, 687, 688

 in feature-based selection, 226–227

 memory and changes in, 687

 saccades, 511–521

  forward model for eye position, 600

  localization error and, 514–516

  in motor learning and control, 591–592

  reafference cancellation in PPC, 600–601

  saccadic compression, 515

  saccadic suppression, 511–514, 1154

  transsaccadic integration and craniotopic maps, 519–521

  updating of internal spatial maps, 514–519

  visual stability and, 511

 transitive inference studies, 687, 688

 value-related signals, 1086

F

F5 neurons, in grasping behavior of monkeys, 626–632

Face recognition

 in adulthood, 467–469

  core behavioral properties in humans, 467–468

  electrophysiological signatures in humans, 469

  neurophysiology in monkeys, 468–469

  roles of experience and genetics, 469–470

 behavioral measures, 467–470, 473–474, 477–478

 development

  for behavioral and neural measures, 477–478

  in four-year-olds to adults, 473–478

  in infancy, 470–473

 grandmother cells in, 312–314

 in infancy

  critical (sensitive) period and, 472

  face individuation, 470–471

  perceptual narrowing, 471–472

 neural measures, 468–469, 474–478

Facial expression

 empathy and, 974–975

 in study of human amygdala, 935–939

  experimental context, 941, 942

  fear, 935–936

  surprise, 936–939

Faculty of language in a broad sense (FLB), 873, 875

Faculty of language in a narrow sense (FLN), 875

False memories, 700

Familiarity, medial temporal lobe function, 680–683

Fear learning/conditioning, 698–699. See also Pavlovian conditioning

 avoidance conditioning, 116, 907–909

 detection of threat, 957–958

 escape from fear (EFF) hypothesis

  conditioned motivation, 909, 915–917

  described, 907–909, 1096

 escape from fear hypothesis (EFF), amygdala contributions to conditioned reinforcement, 914–917, 1095–1097

 facial expression and amygdala response, 935–936, 941, 942

 infant, 891–896

  amygdala in, 891–896

  corticosterone in, 893–896

  maternal separation/deprivation, 895

  neonatal handling, 895–896

  rearing environment alteration, 895

 learned fear response, 906

 neural basis for fear actions, 914–918

 neural basis for fear reactions, 891–896, 909–914, 930, 1095–1097

 research methodology, 906–907

Feature-based selection, 197–198

 attentional-biasing signals, 208–210

 eye movements in, 226–227

 loss in Balint's syndrome, 271–272

 selective neuronal synchronization and, 297–298

 in spatiotemporal analysis of visual attention, 238–240

Feature binding, attention and, 197–198, 274–276

Feature integration theory, attention and, 197–198, 208–210, 226–227, 276–277

Feedback

 within and across populations, 431

 basal ganglia function and, 575–577

 as cognitive control function, 76

 forward versus feedback projections, 1145–1146

 in learning and learning transfer, 160–161

 recurrent feedforward/feedback loops, 438

 visual attention and awareness, 1165–1175

  anatomical observations, 1165–1166

  binocular rivalry role in, 1170–1176

  physiological observations, 1166–1168

  role of feedback in attention, 1168–1170

  visual masking role, 1170–1176

Feedback control

 in motor learning and control, 588, 592

 in optimal control theory, 614–622

Feelings. See also Consciousness

 emotions versus, 1182. See also Emotion

 meaning of, 1138

 as private, 1138

Ferrets

 auditory cortex, rewiring vision into, 97–98

 visual cortex, formation of eye-specific inputs to dLGN, 69, 94–95

Fetal stage

 early, defined, 30

 late, defined, 30

 neuronal circuitry of frontal lobe, 29–32, 30, 31, 32–33, 35, 42

  functional organization, 32, 33

  neurogenetic events, 31

  neurogenic events, 32–33

  structural organization, 29–31, 32

Field excitatory postsynaptic potential (fEPSP), 109–112, 118–121

Fight-or-flight responses, 155

Filling-in. See Perceptual filling-in

Filtering

 attention and, 171

 auditory, 345–348

Fine depth perception, 489–493

Firing rate, 290–291

Fish, vision, activity-dependent refinement of visual maps, 98–99

Fixed action patterns, 906

Flanker interference, 797

Flash suppression, 1142, 1144, 1145, 1154

Fluid reasoning

 analogical, 78, 79

 assessing reasoning ability, 78–80

 brain change and improvements in, 80

 development of, 73, 77–81

 neural correlates of, 79–80

 timing of development of, 78

Focal hand dystonia, 147

Focused attention, 192–193

 distributed attention versus, 199

Footbridge dilemma, 991–992

Formal operations, 78

Fossil record, 52

FOXP2 (forkhead box P2), 59, 861–866, 878, 879

Fragile X syndrome, 147, 166

Free will. See also Consciousness

 neurobiology of, 1138

Freud, Sigmund, 1033

Frogs, modularity in spinal motor system, 546–547

Frontal eye field (FEF)

 anatomy of feedback in primary visual cortex, 1165–1166

 conflict and cognitive control, 255–257

 and dorsal frontoparietal attention network, 219–227

 eye movements and, 517, 518, 600

 virus tracing studies, 556–557

Frontal lobe circuitry, early development of prefrontal cortex, stages of development, 29–44

Frontoparietal attention network, 219–227

 dorsal

  anticipatory signals, 219–223

  causality of top-down biases, 223

  coding locus of attention, 224–226

  conflict and cognitive control, 251–257

  conflict-control model, 252

  eye movements, 226–227

  feature-based selection, 226–227

  functional connectivity, 219–223

  topographic maps/projections, 223–226

 establishing goals

  reward/value signals and limbic system, 227–228

  task sets, 228–229

 nonemotional, task-relevant information and, 727

 physiological mechanisms for selection of visual objects, 229–230

 prefrontal-cingular circuits, 228–229

 ventral

  neuroplasticity of, 166–167

  relation to dorsal attention network, 219–222

  timing of attention and, 193–194

 visual awareness and, 1157–1158

 working memory, 228–229

Frontotemporal lobal degeneration (FTLD), in relational reasoning, 1008–1015

Frozen addicts, 1141

Functional connectivity MRI (fcMRI)

 comparative, 57–58

 dorsal and ventral attention systems, 219–221

Functionalism, 1111

Functional knockout, 858

Functional magnetic resonance imaging (fMRI)

 absolute and relative disparity selectivity, 486–489

 action understanding, 647–648

 age differences in brain activation, 82

 attention and

  conflict processing, 253–255

  connectivity studies, 264

  control of attention, 198

  event-related potential (ERP), 193

  feature-based attention, 209–210

  middle temporal (MT) changes, 190

  object-based attention, 208

  object selection, 242–244

  sequential/simultaneous paradigm, 212–213

  space-based attention, 206–208

  task sets and working memory, 228–229

  temporal correlation of BOLD signal, 219

 auditory object analysis, 371–379

  analysis of categorical processing, 374–375

  effective connectivity analysis, 375–379

  multivariate analysis, 374

  univariate analysis, 372–374

 basal ganglia function and, 576

 blood oxygen level dependent (BOLD) response, 313

  auditory object analysis, 371–376

  degree of similarity in patterns of brain activity, 742–743

  genetic basis of emotional variability, 945–949

  individual differences and, 742

  network-brain links to visualize spiking, 435, 443, 444, 446

  neuronal basis of perceptual illusions, 1144–1145

  semantic unification and, 827–832

  syntactic processing, 810–813

  visuospatial working memory, 74

 brain function and, 1067, 1068, 1070

 comparative, 57–58

 contour detection, 135

 detecting awareness following brain injury, 1125–1127

 emotion regulation, 963–968, 970, 1099

 empathy and, 975–977, 981

 episodic memory tasks, 739

 eye movements and, 520–521

 of face recognition in, 468–469, 477

 fMRI mutation, 147

 integration of conflict processing and attention, 253–255

 interactions between control and memory, 712, 713

 language processing

  developmental verbal dyspraxia, 861

  early language acquisition, 837–838, 839, 850

  morphological processing, 782, 784

  syntactic, 810–813

 in methodology of cognitive neuroscience, 1255–1256, 1257–1258, 1260

 mirror neural system studies, 635, 636

 moral judgment and, 991, 992–993

 neural processing of emotional information, 925–926, 927, 929, 930

 object concepts and, 1040

 perceptual filling-in, 442–449

 phonological processing and, posterior language cortex in speech production, 770

 posterior parietal cortex (PPC) studies, 599–600

 processes in relational reasoning, 1011–1015

 reading ability and, 175–176, 799

 in semantic memory processing, 1062, 1063–1064

 simulation of future events, 754–755

 spiking activity in surface perception, 435, 443, 444, 446

 spontaneous motor initiation, 1192, 1193

 value-related signals, 1087–1088, 1091

 visual attention and, 205–214

  pupillary response, 190

  selection among multiple competing objects, 210–214

  units of selection, 206–210

 visual plasticity and, 166

Functional maps, in primary visual cortex, 409–411

Functional organization of brain, neuronal circuitry of frontal lobe, 32–42

Functional specialization, in Visual Word Form Area (VWFA), 794

Fusiform body areas (FBA), neural processing of emotional information, 926

Fusiform face area (FFA)

 conflict-control model, 252

 cortical loci of face identity processing, 468–469

 in face recognition, 469, 474–479

 neural processing of emotional information, 926

 visual rivalry and, 1156

G

GABAergic cortical interneurons

 activity-dependent refinement of visual maps, 99

 cross-species comparisons of neocortical development, 8–9, 12, 22, 23

 neuronal circuitry of frontal lobe, 35–36, 41, 42–43

Gabor function, 316

Gabor patches, 212, 243, 425, 427

Galanin, in comparative histology, 55

Gambling, 968, 1098–1100, 1187–1188

Gamma-band synchronization, 292–298

Ganglionic eminence (GE), neuronal circuitry of frontal lobe, 31

Gaussian priors, 615, 616, 617

Gazzaniga, Michael, 1221, 1233, 1255

Gender, in lesion studies of language function, 741

Gene transcription, in ocular dominance plasticity, 100–102

Generalist genes, 863

Generalization

 in auditory training, 355–358, 360

 in color vision, 396–406

 overgeneralization, 1048, 1051–1052, 1059

Genetics. See also Evolutionary biology; Genomics

 of emotional variability, 945–949

  amygdala reactivity, 947–948

  conceptual basis of research, 945–946

  importance of, 946

  neuroimaging role, 945–946

  principles of imaging genetics, 946

 inherited color vision deficiencies, 388–392

 of language impairment, 855–856

  approaches to study of, 856–857

  developmental dyslexia, 857–859

  developmental verbal dyspraxia, 860–863

  evidence, 855–857

  perspectives, 863–866

  specific language impairment, 859–860

  speech sound disorder, 860

 in methodology of cognitive neuroscience, 1257

Genomics

 comparative, 58–61

 gene sequencing, 58–61

 phenotype changes, 59–61

Genotypes, 876

Geometric cues, 483

Gestalt psychology, 212–213, 317

Gibbs distribution, 615

Gibbs sampling, 622

Glial acidic fibrillary protein (GAFP), cross-species comparisons of cortical development, 9, 22

Global workspace approach to consciousness

 described, 1111–1112

 explanatory gap and, 1114

 machine consciousness and, 1119–1120

 sensory activation in, 1112, 1146, 1160

Globus pallidus (GPi)

 basal ganglia function, 569–571

 central thalamic deep-brain stimulation, 1131

 virus tracing studies, 553–556

Glomerular modules, 328

Glossogeny, 875

Glutamate cycling, 1070

Glutamate receptors, 112–113

Glutamergic neurons, 35, 42

Glutamergic thalamic afferents, neuronal circuitry of frontal lobe, 36–37, 43–44

Glycoprotein, 94

Gnostic neurons (Konorski), 309–312. See also Grandmother cells (visual cortex)

Goal-directed choice, 1075–1083. See also Goals; Neuroeconomics

 computational basis, 1079–1081

 multiple behavior controllers, 1078–1079

 neurobiological basis, 1079–1083, 1095–1100

 simple binary stimulus choice, 1076–1077, 1079–1083

Goal representation. See also Goals

 in bimanual coordination, 645–647

 hierarchical nature of, 642–644

 on-line control of grasp, 644–645

Goals. See also Goal-directed choice; Goal representation

 frontoparietal network and, 227–229, 626–627

 in learning and learning transfer, 160–161

 premotor cortex and, 1037–1039

Grammar

 agrammatic aphasia, 808

 artificial grammar learning, 880

 components of, 1235–1237

Grammatical categories

 in morphological processing, 782–785

 neuroanatomical dissociation hypothesis, 783–784

Grandmother cells (visual cortex), 309–319

 correlation, 316–318

 cortical function, 314–316

 defined, 310

 history, 309–314

 invariance, 316–318

 symmetry, 316–318

Granger causality analysis, 223

Grasping behavior

 goal representation and, 644–645

 mirror neural system and, 626–638

Gray matter. See also White matter (WM)

 in cognitive control development, 76

 in fluid reasoning development, 80

 and plasticity of human neurocognition, 165

 thickness of, 73–74

Great Chain of Being, 49–50

Grid cells, 121

Gross, Charles, 309–310, 312–313, 318

GY (patient), nonconscious processing of emotion, 1186, 1194–1195, 1199

H

Habits

 goal-directed choice and, 1078, 1083

 medial temporal lobe function and, 679–680

 nature of, 906

Haddad, Rafi, 334–335

Haeckel, Ernst, 50

Hallucinations, 1156

Hamilton-Jacobi-Bellman (HJB) equation, 549

Hand-eye coordination

 in athletics, 155, 156–157

 video games and, 157–158

Hand motor function

 focal hand dystonia, 147

 recovery after stroke, 148–149

 specificity of learning, 154

Hawthorne effect, 155

Heading discrimination task, 500–502, 503–505

Heart disease, 858

Hebb, Donald, 109, 129

Hebbian rule of synaptic plasticity, 99, 100–101, 129

Hebrew, classical, functional morphemes in, 777

Helmholtz, Hermann von, 132, 137, 305, 321, 514, 530, 621

Hemianopia, 792, 1159

Herrick, C. J., 316

Heschl's gyrus (HG), 372–373, 377–378, 1237

Hierarchical control

 in decision making, 1019, 1021

 forms of, 641–642

 memory and, 707–709

 in representation of action, 641–650

  action semantics, 648–650

  action understanding, 647–648

  anatomical versus representational hierarchy, 642–644

  bimanual coordination, 645–647

  goal representation, 644–647

  grasp control, 644–645

  hierarchy of serial behavior, 641–642

  historical perspective, 641–642

 reverse hierarchy theory (Hochstein and Ahissar), 194

 in surface perception, 437–438

Hierarchical Linear Growth Curve modeling, 840

High-frequency stimulation (HFS), 111, 112, 117

Higher order consciousness, described, 1116

Higher order thought (HOT) approach to consciousness

 consciousness of and, 1115–1116, 1182

 described, 1111

 explanatory gap and, 1114

 machine consciousness and, 1119–1120

 problems in, 1115–1118

 self in, 1118

 sensory activation in, 1112

Hillyard principle, 170

Hinckley, John, Jr., 1260

Hippocampus

 amygdala modulation of consolidation in, 729–730

 attractor networks, 121–123

 basal ganglia function and, 575–576

 lesion studies of medial temporal lobe function, 675–678, 681–682, 685–686

 long-term memory and, 229

 long-term potentiation (LTP) studies, 109–111, 116, 119–121

 response to simulation of future events, 756, 759

Histamine, 1140

Histology, human brain specialization, 54–55

HM (amnesia patient), 656, 659, 675

Hodological studies, mirror neural system in monkeys, 626

Holistic/configural processing, in face recognition, 468

Holmes, Oliver Wendell, Jr., 993

Homeostatic afferent system, 1183–1184

Homeostatic processes, in ocular dominance plasticity, 101

Hominoids

 brain specialization, 53–61

  comparative genomics, 58–61

  comparative histology, 54–55

  comparative neuroimaging, 55–58

 types of, 53

Homunculus, 1152–1154, 1248–1249

HOX genes, 876, 878, 879

Hubel, David, 309, 311–312, 314, 409

Humphrey Field Analyzer (HFA-II-I), 1119

Huntington's disease, 561

 basal ganglia functions and, 565, 568, 573–574, 577

Huxley, Thomas H., 52

Hyperdirect pathway, in basal ganglia function, 568–569

Hypocretin, 1140

Hypothalmic-pituitary-adrenal (HPA) responsiveness, 893, 895–896

I

Illusions

 Kanisza illusion, 213

 neuronal basis of, 1143–1145

Illusory correlation, 1051–1052

Imagery debate, 1241–1245

 general lessons from, 1244–1245

 relevance of the brain, 1243–1244

 theory of cognition, 1241–1243

Imaging genetics, 945–949

 amygdala reactivity and human emotion, 947–948

 basic principles, 946

 conceptual basis, 945–946

 importance of, 946

 neuroimaging in, 946

Implicit memory, in perceptual learning, 132

Impulse-control disorders, basal ganglia function and, 572–573

Incest, moral judgment and, 990

Indirect pathway, in basal ganglia function, 568–569

Individual differences, 733

 dangers of averaging across subjects, 739–741

 episodic memory and, 743–747

  sources of variability, 744–747

  variable nature of episodic memory, 743–744

 genetic basis of emotional variability, 945–949

 moral judgment and, 992

 neuroimaging and, 741–742

 in processing of emotional information, 931–932

 similarity between two patterns of brain activity, 742–743

Infancy. See also Developmental stages

 attachment learning, 889–891, 894

 differential development and, 1048

 early language acquisition, 837–851

  bilingual infants, 848–849

  infant lexicon, 843–844

  neuroscience-based measures, 837–839

  phonetic learning, 839–841

  second-language learning, 842, 848–849

  word learning, 842–843

 face recognition in, 470–473

 fear learning, 891–896

 phenomenal consciousness during, 1117–1118

Inference

 in Bayesian statistics, 159, 614–622

 and higher order of thought (HOT) approach to consciousness, 1116

 similarity with control, 613–622

 transitive inference studies of eye movements, 687, 688

Inferior frontal cortex (IFC), in semantic unification network, 827–832

Inferior frontal gyrus (IFG)

 action understanding, 647–648

 language processing and, 260, 811–813

 mirror neural system and, 633–634

 modularity of language and, 1236–1238

 in specific language impairment (SLI), 859

Inferior occipitofrontal fasciculus (IOF), dense perisylvian white matter connectivity, 261

Inferior parietal lobule (IPL)

 mirror neural system and, 626–638

 perisylvian network for spatial orienting, 259–260, 263

Inferotemporal (IT) cortex

 in depth perception, 489

 virus tracing studies, 558–559

Inflections, 777

Information, in integrated information theory (IIT), 1202–1204

Information detection, effect of emotion on, 726–727

Information theory, 1146–1147

Informational masking, auditory, 345–351

 simultaneous multitone maskers, 345–348

 speech recognition and, 348–351

Informational relationships, in qualia space, 1212, 1213

Inhibition

 of attention, 193

 conscious, 1194–1195

Inhibitory avoidance training, 116

Inhibitory interneurons, cross-species comparisons of neocortical development, 7

Input specificity, in memory formation, 113, 114

Instinct to learn, 873

Integrated information theory (IIT), 1111–1112, 1147, 1202–1216

 complexes in, 1205, 1207

 down-set of red, 1215

 information in, 1202–1204

 integration in, 1203, 1204–1205, 1207

 measuring integrated information, 1203–1205

 neurobiological observations, 1205–1209

 up-set of nonred, 1215

Integration control, in relational reasoning, 1006–1007

Intelligence quotient (IQ)

 effect of music lessons on, 156

 experience-dependent learning and, 154–155

 in lesion studies of language function, 741

 measuring, 154–155, 156

 Mozart effect, 154–155

 music lessons and, 156

 socioeconomic factors in, 80, 171

 timing of cortical maturation in frontal regions, 80

Intelligence, integrated information theory of, 1112

Intention

 in intention understanding, 632–633, 635–636

 movement anticipation and, 599–601

Interaural level differences (ILDs), 359–362

Interaural time differences (ITDs), 359–362

Interface hypothesis of attention, 213–214

Interface mechanisms, in phonological processing, 768

Interference, 962–964

 defined, 709

 interactions between control and memory, 710–713

 interference suppression/resolution, 76, 714–719

 reduced, 714–719

Interference control, 1006–1007, 1013–1014

Intermediate sensory representations, 619–621

Intermediate zone (IZ)

 cross-species comparisons of cortical development, 11, 13, 20, 21

 neuronal circuitry of frontal lobe, 31, 33

International Affective Picture Set (IAPS), 964, 966, 970

Internet, ad auctions and, 1250–1251

Interoceptive system, 1183–1184

Interpersonal Reactivity Index (IRI), 978–979

Interpolation

 defined, 436–437

 in surface perception, 439–442

Interpretation, of stimulus, 1038

Interstitial neurons, cross-species comparisons of cortical development, 10

Intracortical connections, neuronal circuitry of frontal lobe, 39

Intralaminar nuclei of the thalamus (ILN), 1140

Intraparietal sulcus (IPS)

 and dorsal frontoparietal attention network, 219–227

 neural correlates in PPC, 604

 neural processing of emotional information, 929

 social cognition and, 955

 in visuospatial working memory, 74

Intrinsic projections

 cost of intrinsic activity, 1068–1070

 monkey entorhinal cortex, 667

 monkey parahippocampal cortex, 665–666

 monkey perirhinal cortex, 663–665

 organization of intrinsic activity, 1070–1071

 rodent entorhinal cortex, 669

 rodent perirhinal cortex, 665, 667

Introspection, 1141–1142

Iowa Gambling Task (IGT), 1098–1099, 1187–1188

Ipsilateral cortex, 94, 98–99, 123, 148

Isolating languages, functional morphemes in, 777

Isometrics

 defined, 614

 duality of Bayesian inference and optimal control, 614–615

J

Jackson, John Hughlings, 741

James, William, 129, 173–175, 954, 1031, 1182–1183

James-Lange theory of emotion, 977, 1182

Jaynes, E. T., 530

Jebsen Taylor Hand function test (JTT), 149

Joint coordinates, 542–543

Journal citation maps, 1222–1230

 developing, 1222–1226

 interpreting, 1226–1230

K

Kalman filter, 602–603, 608–609, 617, 621–622

Kalman gain, 590, 603

Kamada-Kawai algorithm, 1230

Kanisza illusion, 213

Kant, Immanuel, 269, 270

KCC transporter, 36

KE family (multigenerational pedigree), 860–863, 864–865

Khan, Rehan, 330

Konorski, Jerzy, 309–312

Konorski, John, 129

Kullback-Liebler (KL) divergence, 618, 1204

Kuypers/Jürgens hypothesis, 878

L

L cone mosaic

 Bayesian statistics and, 401–404

 described, 395

 functional consequences of, 386–388

 structural organization of, 386, 387

Laminar domain

 bilaminar distribution of early synapses, 32

 neocortical development

  cross-species comparisons, 7, 18–19

  shifts in acetylcholinesterase (AChE), 34

Lancet, Doron, 324

Language impairment, 166, 171, 259–260. See also specific types

 genetics in, 855–856

  approaches to study of, 856–857

  developmental dyslexia, 857–859

  developmental verbal dyspraxia, 860–863

  evidence, 855–857

  perspectives, 863–866

  specific language impairment, 859–860

  speech sound disorder, 860

 in reading process, 792–798

Language processing. See also Language impairment

 attention training for children, 173–174, 176

 auditory processing and, 168–169

 Chomsky's model, 806, 807–808, 837, 855

 cognitive neuroscience of, 1235–1239

  future directions, 1238–1239

  modularity of language, 1235–1238

  right hemisphere in language processing, 1238

 consciousness versus, 1141–1142

 early language acquisition, 837–851

  in autism spectrum disorder (ASD), 845–847

  bilingual infants, 848–849

  infant lexicon, 843–844

  mirror neurons and shared brain systems, 847–848

  neuroscience-based measures, 837–839

  phonetic learning, 839–841

  second-language learning, 842, 848–849

  sentence processing, 844–845

  word learning, 842–843

 in evolutionary biology, 873–881

  deep homology, 873–874, 876–878

  evo-devo perspectives, 876

  human cognitive evolution, 874–876

  mechanisms underlying speech and vocal learning, 878–879

  semantics, 879–880

  syntax, 880

 genetics of language, 855–866

  developmental dyslexia, 857–859

  developmental verbal dyspraxia, 860–863

  evidence, 855–857

  perspectives, 863–866

  specific language impairment, 859–860

  speech sound disorder, 860

 morphological processes, 777–785

  grammatical categories, 782–785

  morphological composition in the lexicon, 778

  neural basis, 778–780

  regular/irregular debate in, 780–782

 perisylvian network for spatial orienting, 259–260

 phonological, 767–774

  auditory-motor integration networks, 771

  defined, 767

  left posterior planum temporale (area Spt) in, 770–771

  mirror neurons in, 773

  motor theories of perception in, 773

  posterior language cortex in left hemisphere, 770

  speech recognition, 769–773

  spoken word recognition, 768–769

  superior temporal sulcus (STS) in, 769

  task dependence, 767–768

 plasticity in development, 169–170

 reading process, 789–800

  dorsal visual pathway, 794–798

  interfacing with verbal system, 798–799

  ventral visual pathway, 789–794

 semantic. See Semantic processing

 signed language, 169–170

 syntactic, 169, 805–814

  lesion studies, 807–810

  neuroimaging studies, 810–813

  syntactic representations and processing, 805–807

  syntax-semantics framework, 824–827

 Wernicke-Geschwind model, 741

Late infancy stage

 defined, 30

 neuronal circuitry of frontal lobe, 30, 31, 39–41

  functional organization, 39–41

  neurogenetic events, 39

  structural organization, 39

Late positive potentials (LPP), neural processing of emotional information, 926

Late preterm stage

 defined, 30

 neuronal circuitry of frontal lobe, 30, 31, 36–37, 42, 43, 44

  functional organization, 37

  neurogenetic events, 36–37

  structural organization, 36

Lateral amygdala (LA), in fear reaction, 911–912, 914–915, 918–919

Lateral entorhinal area (LEA), comparative anatomy of, 667–669, 671

Lateral frontal cortex (LFC), in decision making, 1021–1023

Lateral geniculate nucleus (LGN)

 baseline activity in spatial attention, 206–208

 eye movements and, 513

 feedback in, 1165–1166, 1168–1169, 1173

 in formation of visual pathway, 92–95

 grandmother cell research, 309, 315

 physiology of feedback in, 1165–1166, 1168–1170

 receptive fields in visual cortex, 410–413

 in rewiring vision into auditory pathway, 95–98, 167

 visual rivalry and, 1156

Lateral intraparietal cortex (LIP)

 eye movements and, 516–518

 in valuation process, 1089, 1090

Lateral prefrontal cortex, in emotion regulation, 964–965

Laughter, in pathological laughter and crying (PLC), 1184

Layer I pyramids, neuronal circuitry of frontal lobe, 31, 37, 44

Layer II pyramids, neuronal circuitry of frontal lobe, 37

Layer III pyramids, neuronal circuitry of frontal lobe, 29–32, 36–41, 44

Layer IIIC pyramids, neuronal circuitry of frontal lobe, 37, 38, 39, 41, 44

Layer IV pyramids, neuronal circuitry of frontal lobe, 31, 32, 36, 37, 41

Layer V pyramids

 in comparative histology, 54

 neuronal circuitry of frontal lobe, 29, 33, 37, 38, 39, 41, 44

Layer VI pyramids

 neuronal circuitry of frontal lobe, 31, 36–39, 92–98

 visual awareness and, 165–1168, 1155–1156, 1159, 1170, 1171, 1172–1176

 visual plasticity in postnatal development, 129–132, 136–137

Le Gros Clark, W. E., 51

Learned fear response, 906

Learning

 basal ganglia function and, 375–377

 experience-dependent, 154–155, 161, 167

 fear conditioning, 116, 118, 698–699

 infant

  attachment, 889–891, 894–896

  fear, 891–896

 memory versus, 655

 motor. See Motor processing

 perception versus, 675

 rewards in, 161, 588, 592–593

 in simple binary stimulus-choice paradigm, 1081, 1083

Learning transfer, determinants of, 158–161

LeDoux, Joseph, 696

Left visual field (LVF)

 in attending parts of words, 797–798

 in early visual processing of printed words, 791–792

 in semantic processing, 820

 in serial decoding, 797–798

Lesion studies

 of action semantics, 649–650

 of aphasia, 1236

 of basal ganglion function, 571, 575–576, 594

 in conditioned fear reactions, 914–917, 1096–1097

 of decision making, 1094

 of emotion regulation, 968–969, 970

 implicit perception and, 195–196

 of language function, 741

 of medial temporal lobe function, 675–686

 in methodology of cognitive neuroscience, 1256

 of morphological processing, 779, 782

 paradoxical effect of brain, 142–143

 parahippocampal function in rats, 660, 670

 phonological processing and, posterior language cortex in speech production, 770

 plasticity as opportunity for intervention, 148

 posterior parietal cortex (PPC) function, 601, 603–604

 of pure alexia, 794

 of spatial dyslexia, 798

 spatial neglect and, 259, 263–264, 266

 of syntactic processing, 807–814

 in visual plasticity, 131–132

Lettvin, Jerry, 309, 310, 312

Levels of representation, in learning and learning transfer, 159

Levick, Bill, 311

Lewis, Donald, 694

Lexical-semantic systems, 771–773

Lexicon

 infants’ early, 843–844

 morphological composition in, 778

Libet, Benjamin, 1192–1193

Libet clock paradigm, 1192–1193

Ligand-gated (NMDA-type) receptors/channels, cross-species comparisons of cortical development, 15

Likelihood function, 527

Limbic system

 neuronal circuitry of frontal lobe, 31

 reward/value signals in, 227–228

Linkage studies

 of developmental dyslexia, 857–858

 genetic linkage sites, 863–864

 nature of, 856

Lipps, Theodore, 974

LISA model of relational reasoning, 1007–1010, 1011, 1013, 1015

Lissencephaly Type I, 14

Little Albert (case), 907

Lømo, Terje, 109–111

Local combination detector (LCD) model, 789–790, 794, 799

Localization error, eye movements and, 514–516

Locke, John, 129

Locked-in state (LIS), 1124–1125

Locus coeruleus (LC), in attachment learning, 891

Locus of attention

 coding in dorsal attention network, 224–226

 spatial attention in visual system, 237–238

Loftus, Elizabeth, 700

Long-term depression (LTD)

 discovery of, 111

 plasticity of synaptic connections, 109–123, 146–147

  overview of cellular mechanisms, 111–113

  properties relevant for memory formation, 113–114

  studies in behaving animals, 114–119

 of visual inputs, 100–101

Long-term memory (LTM)

 consolidation theory and, 692–695

 frontoparietal network and, 229

 molecular and cellular correlates, 697–698

 path integration and, 683–684

 working memory versus, 683

Long-term potentiation (LTP)

 discovery of, 109

 in fear reaction, 912

 hippocampal receptive fields, 119–121

 place fields, 119–121

 plasticity of synaptic connections, 109–123, 146–147

  overview of cellular mechanisms, 111–113

  properties relevant for memory formation, 113–114

  studies in behaving animals, 114–119

 of visual inputs, 100–101

Long-term potentiation in late phase (L-LTP), 112–113, 697–698

Low-frequency stimulation (LFS), 111, 112

LQG, 617, 621–622

M

M cone mosaic

 Bayesian statistics and, 401–404

 described, 395

 functional consequences of, 386–388

 structural organization of, 386, 387

Macaque. See Monkeys

MacArthur-Bates Communicative Development Inventories (CDI), 840

Machine consciousness, 1119–1120

Machine learning, 158–159

Macular degeneration (MD), 131–132

Magnetic resonance imaging (MRI), in comparative neuroimaging, 55

Magnetoencephalography (MEG). See also EEG/MEG studies

 early language acquisition, 837–839, 842, 847, 850

 empathy and, 975, 982

 neural processing of of emotional information, 925–926, 930

Main complex, 1205

Mammals, cross-species comparisons of neocortical development, 7–23

Manipulation, as cognitive control function, 76

MAP2, 55, 57

Mapping connections, in relational reasoning, 1008

Marginal zone (MZ)

 cross-species comparisons of cortical development, 11, 13

 neuronal circuitry of frontal lobe, 30–32, 33, 43

Marking Paradigm, 193

Marr's theory of object perception, 795

Masking. See also Auditory masking

 metacognitive, 1198, 1199

 in saccadic suppression, 512, 1154

Master map of locations (Treisman), 273

Maternal separation/deprivation, 895

Matin, Leonard, 514

Matrix metalloproteinases (MMP), 92

McGurk effect, 499

MCHI (microcephalin), 57–59

Mean population response

 dynamics, 425

 primate cortex, 422–425

 sparseness of, 423–425

 spatial spread of, 422–423

 variability, 425–427

Measurement density, 527

Medial bank of intraparietal sulcus (MIP), 599–600

Medial entorhinal area (MEA), comparative anatomy of, 667–669, 671

Medial frontal cortex (MFC), in decision making, 1023–1027

Medial geniculate nucleus (MGN), in rewiring vision into auditory pathway, 95–98, 167, 168

Medial nucleus of CM (CEm), in fear reaction, 912–913, 918–919

Medial prefrontal cortex (mPFC)

 in conditioned fear reactions, 917, 918

 in emotion regulation, 963, 965–966

 moral judgment and, 990–991

 object concepts and, 1038

 social cognition and, 954–956

 in surprise reactions, 936–939

Medial superior temporal area (MSTd)

 neuron response in variants of heading discrimination, 503–505

 optic flow in primates, 502–503

Medial temporal lobe

 memory function, 675–687

  awareness, 686–687

  declarative memory, 686–687

  habit learning, 679–680

  intact visual perception, 675–678

  path integration, 683–684

  recollection and familiarity, 680–683

  remote memory, 684–686

  response to simulation of future events, 755

  working memory, 678–679

 parahippocampal region, 659–671

  boundaries and nomenclature, 660–662

  connectivity in, 662–669

  damage to, 659–660

  defined, 660

  entorhinal cortex, 659–660, 661, 662, 667–671

  in monkeys, 660–666, 667

  parahippocampal cortex, 659, 661, 665–666

  perirhinal cortex, 659, 660–665

  postrhinal cortex, 663, 666–667, 670

  in rodents, 662, 665, 666–671

 in perceptual learning, 132

Mediodorsal nucleus, neuronal circuitry of frontal lobe, 35

Medium spiny neuron (MSN), response to severe brain injury, 1130–1131

Memory. See also Amnesia; Episodic memory; Priming; Semantic memory; Working memory

 autobiographical, 684–686, 726, 731, 753

 cognitive control and. See Cognitive (executive) control, memory and

 cognitive tradition, 691, 699–700

 defined, 691

 emotional, 700, 725

 false memories, 700

 imperfections of, 656–657

 learning versus, 655

 medial temporal lobe function and, 675–687

  awareness and memory, 686–687

  habit learning, 679–680

  path integration, 683–684

  recollection and familiarity, 680–683

  remote memory, 684–686

  visual perception, 675–678

  working memory, 678–679

 nature of, 655

 in perceptual learning, 132–136

 physiological tradition, 691

 reconsolidation, 656, 691–700

  alternative interpretations, 696–698

  cognitive implications, 699–700

  consolidation theory, 692–693

  constraining, 695–696

  reviving, 693–695

  systems, 698–699

 in semantic unification framework, 819

 in spatial learning, 114–116, 119–121

 synaptic modifications and, 109–111, 113–119, 121–122

Memory impairment. See also Amnesia

 future-event simulation and, 752–754

Memory processing theory (Lewis), 694

Mental rotation, video games and, 157, 159

Mentalizing, 954, 955–956, 973–974. See also Empathy; Social cognition

Messenger RNA (mRNA), comparative, 59–61

Mice. See Rodents

Micrographia, striatal damage and, 593–594

Middle longitudinal fasciculus (MdLF), connectivity studies, 261–262

Middle superior temporal (MST)

 motion sensitivity of, 166, 318

 symmetry and invariance, 318

Middle superior temporal (TST), eye movements and, 513

Middle temporal (MT)

 changes with attention, 190

 depth perception, 483–496

  binocular disparity processing, 484–489

  coarse and fine discrimination, 489–493

  motion parallax, 484, 493–495

 eye movements and, 513

 motion sensitivity of, 166, 284–285, 318

 symmetry and invariance, 317–318

Midfetal stage

 defined, 30

 neuronal circuitry of frontal lobe, 30, 31, 32–33, 34

  functional organization, 33

  laminar shifts in acetylcholinesterase (AChE), 34

  neurogenic events, 32–33

  structural organization, 32

Midlateral PFC, cascade model and, 1023

Miller, George A., 1221, 1233

Mimicry, 114

Minimally conscious state (MCS), 1123, 1124, 1125–1127, 1130–1134, 1139

Minimum information partition (MIP), in qualia space, 1214

Mirror-invariant representation, 798

Mirror neuron system, 625–638

 defined, 625

 discovery, 847

 human, 633–638

  anatomy, 633–635

  intention understanding, 635–636

  motor cognition in autism, 636–638

  plasticity, 635

 monkey, 626–633

  anatomy, 626

  audiovisual, 630–632

  functional properties, 627–632

  goal-relatedness/chaining, 626–627

 and shared brain systems, 847–848

Mismatch negativity (MMN), 840–842, 846

Mismatch problem, and higher order of thought (HOT) approach to consciousness, 114–115

Mnemonic activity, 669–670

 reduced interference in memory tasks, 714–715

 reduced uncertainty in memory tasks, 715–719

Mnemonic effects of emotion, 730–731

Model-animal approach, comparative approach versus, 52–53

Modes, in qualia space, 1213

Modular hypothesis

 of cortical architecture, 1247–1249

 in language processing, 1247–1249

Monkeys. See also Neural populations in primate cortex

 attention research

  attentional bottleneck, 282–283

  attentional processing, 295, 297

  biased competition theory, 198–199

  feature-based selection, 241–2492

 chimpanzee population decline, 61

 comparisons of mammalian cortical development, 7–23, 56–58, 1138–1139

 conscious perception in, 153–154

 decision making by, 1085–1086, 1089–1090

 depth perception in, 489–490

 empathy research, 975–982

 in evolutionary biology, 49–61

 face recognition in, 468, 471, 472

 language processing in evolutionary biology, 873–876, 880

 memory, analysis of parahippocampal region, 660–666, 667

 model-animal versus comparative approach and, 52–53

 motor processing, mirror neuron system, 625, 626–633

 multisensory integration, 499–508

  correlation with behavioral choice, 505–506

  cortical neuron response, 502–503

  cue reliability, 506–507

  heading discrimination, 500–502, 503–505

  optic flow, 500–503

Monkeys (continued)

  signal detection theory, 503–505

  vestibular signals, 500–502

 neuronal basis of perceptual illusions, 1143–1144

 neuronal circuitry of frontal lobe, 33, 41

 plasticity of neurocognition, 165

 posterior parietal cortex (PPC), movement anticipation and anticipation, 599–600

 visual cortex

  formation of eye-specific inputs, 70

  grandmother cell studies, 313–315

  perceptual learning and, 133, 134–135

  task-specific top down influences, 136–137

Monoamine oxidase-A (MAO-A), in imaging genetics studies, 947

Monochromacy

 blue cone, 390

 rod, 390–392

Monocular deprivation (MD)

 partial spatial loss due to, 273–277

 and plasticity of ocular dominance, 99–102

Moral judgment, 987–1001

 brain damage and, 987–988

 dual-process morality, 991–993

 mapping moral emotion, 988–991

 mental states of moral agents, 993–994

 neuroeconomics and, 530, 994–995

Morphemes

 derivational, 777

 functional, 777–778

 ignoring, 779

Morphological processes, 777–785

 grammatical categories, 782–785

 morphological composition in the lexicon, 778

 neural basis of, 778–780

 regular/irregular debate in, 780–782

Morphophonology, 780

Morris water maze task, 114–116

Motherese, 846–847

Motion detection, visual plasticity and, 166, 167

Motion parallax

 defined, 493

 in depth perception, 484, 493–495

Motivation

 in avoidance conditioning, 116, 907–909

 conditioned, 909

 in learning and learning transfer, 161

Motivational control, in decision making, 1023–1027

 anatomical definitions, 1024

 changing action-outcome associations, 1025

 changing task demands, 1024–1025

 theories of MFC function, 1024

Motor act, defined, 632

Motor act representations, 627

 mirror neural system in monkeys, 626–628

Motor action, defined, 632

Motor cortex (M1)

 athletic domain, 155, 156–157

 cortical mapping studies, 142–146

 forward state estimation for online control, 602–603

 organization, 553, 554–555

 specificity of learning, 154, 155–156

Motor effector manipulations, in phonological processing, 771

Motor primitives, 541–549

 compositionality, 543, 547–548

 modularity in frog spinal motor system, 546–547

 movement planning to execution, 541–543, 547

 nature of, 543

 synergies, 543–546, 548–549, 619–621

Motor processing

 in autism, 636–638

 basal ganglia function and, 568–573, 575–577, 579

 computational neuroanatomy, 581–596

  cerebellum, 591–592

  limitations in applying theory, 595

  parietal cortex damage and state estimation, 594

  problem in reaching, 589–590

  problem of motor control, 587–588

  rewarding nature of sensory states, 592–593

  striatal damage in assessing movement costs and rewards, 593–594

 consciousness and

  conscious veto of, 1193–1194

  spontaneous motor initiation, 1191–1193

 mirror neuron system, 625–638

  defined, 625

  human, 625, 633–638

  intention understanding, 632–633, 635–636

  monkey, 625, 626–633

 object concepts, 1035

 optimality in, 615–617

 sensory processing compared with, 613–622

  algorithms for learning and online computation, 621–622

  Bayesian inference, 614–622

  inference versus control, 613–614

  intermediate representations, 619–621

  optimal control, 614–619

Motor speech areas, in phonological processing, 770–771

Motor-speech systems, 771–773

Motor theories of perception, 773

Movement release and inhibition

 basal ganglia function, 568–573, 579

 conscious, 1194–1195

Mozart effect, 154–155

MUC (memory, unification, control) framework, 819

Multidimensional scaling (MDS), in auditory object analysis, 368–370

Multiple-self models, in valuation process, 1088–1089

Multiscale spatial frequency filing theory, 436

Multisensory integration, 499–508. See also Sensory processing

 correlation with behavioral choice, 505–506

 cortical neuron response, 502–503

 cue reliability, 506–507

 heading discrimination, 500–502, 503–505

 optic flow, 500–503

 in phonological processing, 770–771

 signal detection theory, 503–505

 vestibular signals, 500–502

Muratoff's fascicle, 36

Muscle coordinates, 542

Muscle synergies, motor behavior and, 543–546, 548–549, 619–621

Musical domain

 effect of music lessons on IQ, 156

 Mozart effect, 154–155

Myelination, of white matter, 76

Myelinization, neuronal circuitry of frontal lobe, 42

Myelogenesis, neuronal circuitry of frontal lobe, 39, 41

Myohyloid muscle (MH), in autism, 636–638

N

N170 potential, in face recognition, 472–473, 474–477, 477

N200 potential, neural signatures of word learning, 843

N290 potential, in face recognition, 472–473

N400 potential, in semantic processing, 169, 170, 820–827, 845

Narrative self, 954

National Institutes of Health (NIH), 61

Native language neural commitment (NLNC) hypothesis, 840, 850

Near-infrared spectroscopy (NIRS), early language acquisition, 837–838, 839, 846–847

Neglect dyslexia, 795–796

Neocortical function

 cross-species comparisons of mammals, 7–23

  cognitive processing, 7–8, 20, 22–23

  cortical architecture, 7

  cortical size determinants, 15–17

  differentiation level, 52–53

  neuronal cell migration, 10–14

  onset of neurogenesis, 8

  origins of cortical neurons, 8–9

  protomap hypothesis, 18–19

  radial unit hypothesis, 14–15

  span of neurogenesis, 8

  stages of cortical development in humans, 20–22

  synaptic connections, 7, 19–20

  transient embryonic zones, 9–10

 prefrontal. See Prefrontal cortex (PFC)

Neonatal stage

 defined, 30

 neuronal circuitry of frontal lobe, 30, 37–39, 44

  functional organization, 37–39

  neurogenetic events, 37

  structural organization, 37

Neural networks

 computational model for texture filling-in, 442–447

  global architecture, 442–443

  single processing units, 442

 dynamic changes in activity, 142–146

 frontoparietal attention network, 219–227

 network-brain links, 443–444

 perisylvian, 259–266

 synaptic plasticity in, 121–123

Neural populations in primate cortex

 decoding, mechanisms, 427–429

 encoding, 419–432

  mean response, 422–425

  response variability, 425–427

  theoretical framework, 420–421

  in vivo measurement, 421–422

Neural priming, 715, 717

Neural signatures

 in sentence processing, 844–845

 in typically developing children, 839–841

 of word learning, 842–843

Neural tuning, 456–463

 central and anterior (CIT/AIT), 461–465

 posterior (PIT), 458–461, 463–464

Neuroeconomics

 defined, 530, 1075

 emotion in, decision making and, 1098–1100

 of goal-directed choice, 1075–1083

  computational basis, 1079–1081

  multiple behavior controllers, 1078–1079

  neurobiological basis, 1079–1083, 1095–1100

  simple binary stimulus choice, 1076–1077, 1079–1083

 moral judgment and, 994–995

 valuation in, 1085–1091

  amygdala and, 1097

  basic structure, 1087–1089

  choice and, 1089–1091

  initial investigations, 1098–1100

  striatum and, 1097

  two-stage model, 1085–1087

Neuroepithelium, cross-species comparisons of cortical development, 9–10

Neuroimaging. See also Imaging genetics; specific types of imaging

 comparative, 55–58

 emotion regulation and, 961–970, 1099

  commonalities across strategies, 968–969

  differences across strategies, 969

  future directions, 969–970

  unique executive function system, 969

 functional, 58

 of future-event simulation, 754–757

 individual differences in, 741–742

 of morphological processing, 779, 780–785

 random-effects analysis, 742

 structural, 55–58

Neuronal cell migration, cross-species comparisons of cortical development, 10–14

Neuronal correlates of consciousness (NCC), 1140–1141, 1143–1145, 1172–1176

Neuronal mechanisms, in perceptual learning, 133–136

 discrimination learning, 133–134

 enhanced responsiveness, 134–135

 shifted cortical representation, 134–135

Neurons. See Neural populations in primate cortex; specific types of neurons

Neuropeptides

 neuronal circuitry of frontal lobe, 35

 neuropeptide Y (NPY) in imaging genetics studies, 948

Neuroplasticity, 141–150, 165–176. See also Plasticity

 as cause of disease, 147

 complementary mechanisms in control of, 146–147

 cortical mapping studies, 142–146

 cross-species comparisons of cortical development, 19

 interventions, 148–149, 173–176

 of mirror neural system, 635

 as opportunity for intervention, 148–149, 173–176

 plasticity as normal state, 142

 profiles

  attention, 170–173

  audition, 167–169

  language, 169–170

  vision, 166–167

Neurotransmitters, cross-species comparisons of cortical development, 18

NLM-e, 844

NMDA (N-methyl-d-aspartate) receptors

 muscle synergies and, 546–547

 synaptic plasticity and, 111–116, 117, 119–121

No consciousness theory of consciousness, 1114

Noise, additive versus multiplicative, 425

Noise exclusion, attention and, 171, 173

Nondeclarative memory, forms of, 675

Nonspatial working memory, development of, 75

Nonspeech signals, 846–847

Noradrenaline, 1140

Norepinephrine, 1140

Norepinephrine (NE), in mediating learned behavior, 890–891, 894

Notch functions, cross-species comparisons of cortical development, 9

Novel orientation, in learning and learning transfer, 159

NPY, 35

Nucleus accumbens (NAcc)

 in conditioned fear reactions, 917–918

 in decision making, 1094, 1097

Numb (protein), cross-species comparisons of cortical development, 9

Nyquist frequency, 383

O

Object analysis

 auditory. See Auditory processing

 concept of, 367–368

Object-based selection, 191–192

 attentional-biasing signals, 208

 loss in Balint's syndrome, 270–271

 neuroimaging studies, selecting among multiple competing objects, 210–214

 physiological mechanisms, 229–230

 in spatiotemporal analysis of visual attention, 240–246

 units of selection, 208, 209

Object classification, 159

Object concepts

 defined, 1031

 hierarchical organization of, 1031–1032

 nature of, 1031–1032

 neural foundations, 1032–1042

  acting, 1032–1035

  anterior regions of temporal lobe, 1040–1041

  domain-specific neural circuitry, 1035–1041

  feeling, 1032–1035

  perceiving, 1032–1035

  visual processing, 1032

Object recognition

 auditory, 367–380

  concept of auditory object, 367–368

  fMRI studies, 371–379

  manipulation of natural stimuli, 368–370

  stimuli based on sequence of objects, 370–371

  synthetic stimuli, 370

 in grasping studies, 644

 visual, 159, 455–465

  in discriminative learning, 133–134

  network processing of boundary fragments, 463–464

  object concepts and, 1031–1042

  retinal representation, 455

  three-dimensional surface fragments, 460–463

  two-dimensional object boundary fragments, 455–460

  word perception as object perception, 789–792

Object substitution masking, 200

Objective approaches, to measuring visual awareness, 1151–1152

Observer framework, 601–603

 accounting for neurobiological explanations, 1205–1209

 feedback in visual attention, 1165–1175

 ideal Bayesian observer, 420–421, 530

 Kalman filter, 602–603, 608–609

 nature of observer, 602

 sensory biases in selective attention, 219–223

Obsessive-compulsive disorder (OCD), 561

 basal ganglia function and, 568, 571, 572, 577

Occipitotemporal sulcas, 662

Ocular dominance

 ocular dominance columns (ODCs)

  eye-specific inputs to dLGN, 68–70, 94

  formation of, 67–68

 plasticity of, 91, 99–102

Ocular dominance (continued)

  anatomy of, 99

  changes in extracellular matrix, 101

  critical periods, 100

  gene screens for novel factors, 101–102

  Hebbian mechanisms, 100–101

  homeostatic mechanisms, 100–101

  lid suture, response to, 99–100

  long-term depression (LTD) of inputs, 100–101

  long-term potentiation (LTP) of inputs, 100–101

  monocular deprivation (MD), 99–102

  structural, 101

Odor learning

 in attachment, 889–890

 in aversion, 892–893

Olfaction, 321–336

 encoding

  odor, 326–327, 330–332

  from percept to molecule, 330

  spatial, 327–329

  temporal, 329–330

 infant odor learning and attachment, 889–890

 odor space

  constructing perception-based, 330–332

  model from physical to perceptual space, 333

  physiochemical molecular descriptor space, 332–333

  to predict neural activity in olfactory system, 333–335

 olfactory system

  described, 322–324

  olfactory bulb, 325–326, 328

  olfactory cortex, 326

  olfactory epithelium, 324–325, 327–328

  predicting neural activity in, 333–335

Olfactory cortex

 described, 326

 infant odor learning and attachment, 889–890

Open loop control, 615–617

Operant conditioning, 310

Optic chiasm formation, 92

Optic flow, 318

 perception of heading from, 500–502

 primate cortical neuron response to, 502–503

Optic tectum, targeting and retinotopic wiring, 92

Optimal control theory, 549

 duality with Bayesian inference, 614–622

  algorithms for learning and online computation, 621–622

  general duality, 617–619

  intermediate representations, 619–621

  isometric tasks, 614–615

  optimality in sensory and motor processing, 615–617

 in motor learning and control, 588

 optimal estimation versus, 618–619

Optimal decoder, 420

Optimal encoder, 420

Optimal estimation, 525–533

 Bayesian formulation, 527–529, 530–531

 in the brain, 530–533

 computational basis for motor synergies, 548–549

 defined, 525

 formulations of, 525–529

 optimal control versus, 618–619

 physiological implementation, 531–533

 regression formulation, 525–527

Optimal lag time (OLT), 604–609

Orbitofrontal cortex (OFC)

 in conditioned fear reactions, 917, 918

 in emotion regulation, 965, 966–968, 969

 moral judgment and, 988

 in processing of emotional information, 932

 in simple binary stimulus-choice paradigm, 1081–1083

Order discrimination, in relative-learning tasks, 359

Orexin, 1140

Orientation discrimination, in discriminative learning, 133–134

Orientation scotomas, 411–413

Orientational selectivity, 309, 311–312

Origin of Species (Darwin), 50–52

Other-race effect, in face recognition, 468

Overgeneralization, 1048, 1051–1052, 1059

P

P600 potential, in semantic unification, 824–826, 845

Pain

 awareness of, in infancy, 1117–1118

 comparisons of species, 1138

Pain syndromes, 147

Pajek software, 1224, 1226–1227

Parahippocampal cortex

 comparative anatomy of, 659, 665–666

 damage to, 659–660

Paralexias, 779

Parallel distributed processing (PDP), 1047–1053

 in conceptual development, 1048–1053

 in conditioned fear reactions, 913–914

 fundamental tenets, 1047–1048

Paralysis, transient form of, 1141

Parent training, 176

Parietal cortex

 audition and, 167–168

 frontoparietal attention network, 219–230

  anticipatory signals, 219–223

  coding locus of attention, 224–226

  establishing goals, 227–229

  eye movements, 226–227

  feature-based selection, 226–227

  functional connectivity, 219–223

  physiological mechanisms for selection of visual objects, 229–230

  prefrontal-cingular circuits, 228–229

  reward/value signals and limbic system, 227–228

  task sets, 228–229

  top-down biases, 223, 251–252

  topographic organization of maps, 223–226

  working memory, 228–229

 frontoparietal mirror neuron system in motor processing, 625–638

  defined, 625

  human, 625, 633–638

  intention understanding, 632–633, 635–636

  monkey, 625, 626–633

 impact of damage on state estimation, 594

 stroke in, 144

Parkinson's disease, 560–561

 basal ganglia functions and, 565, 567, 568, 570–574, 577, 594

 effects of striatal damage, 593–594

Parsing, 812, 813

Part-in-spacing-altered-whole effect, in face recognition, 468

Part-whole effect, in face recognition, 468

Path integration, medial temporal lobe function, 683–684

Pathological laughter and crying (PLC), 1184

Pavlovian conditioning, 310

 actions in, 906–909, 914–918

 avoidance conditioning, 116, 907–909

 components of, 906–909

 fear response, 906–919

 goal-directed choice and, 1078–1079, 1083

 learning tasks, 116, 118, 319

Pavlovian-to-instrumental transfer (PIT), 909, 915–917

Pax6 genes, 876–877, 878, 879

People Pieces Analogies, 1011

Perception. See also Depth perception; Surface perception

 basal ganglia function and, 575–577

 emotion and, 925–932

  automaticity, 929–931

  behavioral effects on perception, 926–928

  cultural factors, 931–932

  current behavior goals, 932

  neural circuits underlying attention, 928–929

  neural processing in perception, 925–926

  personality factors, 931–932

 knowing versus, 1035

 learning versus, 675

 motor theories of, mirror neurons and, 773

 neuronal basis of perceptual illusions, 1143–1145

 object concepts and, 1031–1042

Perception-based odor space

 constructing, 330–332

 in predicting neural activity in olfactory system, 333–335

Perceptual asymmetry, in early visual processing of printed words, 791–792

Perceptual face-space, 468

Perceptual filling-in, 435–449

 active interpolation theory

  described, 435

  early visual system, 437–439

  evidence for, 439–442

 computational model, 442–449

 defined, 436–437

 future research directions, 449

 insights, 447–449

 limitations of research, 449

 processes in surface perception, 435–441

 simulation studies, 443–447

Perceptual learning, 132–136

 auditory, 132–133, 353–363

  characteristics, 358–362

  neural processes, 353–358

  neural underpinnings, 362–363

 cortical recruitment in, 132–133

 neural underpinnings of, 362–363

 neuronal mechanisms, 133–136

 psychophysics of, 132

Perceptual masking, 348–349

Perceptual memory, executive memory versus, 708–709

Perceptual narrowing, in face recognition, 471–472

Perceptual organization principles, 212–213, 317

Perceptual theory of speech production, 773

Perceptual valence, 331–332

Perforant path (PP), 109

Performance monitoring, as cognitive control function, 76

Perfusion-weighted imaging (PWI), connectivity studies, 264

Periaqueductal gray (PAG), 878

Perineuronal nets (PNN), in ocular dominance plasticity, 101

Perinuclear cage, cross-species comparisons of cortical development, 14

Perirhinal cortex, comparative anatomy of, 660–665

Perisylvian neural network, 259–266

 role in human right hemisphere, 263

 spatial neglect as disconnection syndrome, 263–264

 white matter connectivity, 260–262

Personality factors, in processing of emotional information, 931–932

Phenomenal consciousness. See also Higher order of thought (HOT) approach to consciousness

 during childhood, 1117–1118

 described, 1113–1114

Phenomenology, in qualia space, 1214–1215

Phenotype, discovery and changes, 59–61

Phenotypes, 876

Phobias, 927, 928

Phonemes

 mirror system for, 625

 in second-language learning, 842

Phonetic learning

 interaction with word learning, 844

 neural signatures in typically developing children, 839–841

Phonological processing, 767–774

 auditory-motor integration networks in, 771

 defined, 767

 left posterior planum temporale (area Spt) in, 770–771

 mirror neurons in, 773

 morphological processing and, 779

 motor theories of perception in, 773

 posterior language cortex in left hemisphere, 770

 speech recognition, 769–773

 spoken word recognition, 768–769

 superior temporal sulcus (STS) in, 769

 task dependence, 767–768

 visual representations and, 799

Photodiode thought experiment, 1202–1203, 1211–1212

Phylogenetic scale, 50

Physiochemical molecular descriptor space, 332–333

Piaget, Jean, 78

Pictorial cues, 483

Place cell networks, 121–123

Place fields, in long-term potentiation (LTP), 119–121

Plaid paradigm (Adelson and Movshon), 317–318

Planum temporale

 in human brain specialization, 53

 in phonological processing (area Spt), 770–771

  connection to motor speech areas, 770–771

  motor effector manipulations, 771

  sensorimotor response properties, 770

  speech related visual stimuli, 771

Plasticity. See also Neuroplasticity

 amygdala, lack of, 892

 defined, 89

 dynamic activity across neural networks, 142–146

 as normal state, 142

 synaptic, 109–123

  attractor dynamics in neural networks, 121–123

  long-term depression (LTD) of cellular mechanisms, 109, 111–119, 122–123, 146–147

  long-term potentiation (LTP) of cellular mechanisms, 109, 111–121, 122–123, 146–147

  modifications as means for memory, 109–111

 training-related, 153–161

  complex learning environments, 156–158

  determinants of learning and learning transfer, 158–161

  impact of practice, 154–156

  specificity of learning, 153–154

 visual cortex, 129–137

  lesions and, 131–132

  neuronal activity in formation of eye-specific connections, 67–71

  ocular dominance plasticity, 91, 99–102

  perceptual learning and, 132–136

  postnatal development, 129–131

  profiles, 166–167

  top-down influences, 134, 136–137

Pleasantness, perceptual, olfactory, 331–333, 336

Point of view, 1203, 1205

Populations. See Neural populations in primate cortex

Positron emission tomography (PET)

 basal ganglia function and, 576

 brain function and, 1067–1068

 comparative, 57

 in emotion regulation, 964, 970

 forebrain dysfunction following severe brain injury, 1130

 motor cortex activity, 142

 neural processing of emotional information, 925–926

 object concepts and, 1033, 1040

 posterior parietal cortex (PPC) and, 601

 in semantic memory processing, 1062

 in semantic unification network, 831

 simulation of future events, 754–756

Posner's cuing paradigm, 236, 242, 282

Postconceptual week (PCW), in stages of corticogenesis process, 29, 30–37

Postdiction, eye movements and, 518

Posterior cingulate cortex (PCC)

 moral judgment and, 988, 993–994

 reward/value signals in limbic system, 228

Posterior IT (PIT) neural tuning, 458–461, 463–464

Posterior language cortex, in speech production, 770

Posterior lateral PFC, cascade model and, 1022–1023

Posterior parietal cortex (PPC), 167

 state estimation, 599–609

  dynamic, 606–609

  movement intention and anticipation, 599–601

  neural correlates, 604–607

  for online control, 601–603

  sensorimotor control, 603–607

 virus tracing studies, 558

Postmitotic cells, cross-species comparisons of cortical development, 18–19

Postphonemic processing, 769

Postrhinal cortex, comparative anatomy of, 663, 666–667, 670

Posttraumatic stress disorder (PTSD), 147, 928

Power spectrum model of masking, 345

PR-LTM (postreactivation long-term memory), 693–698, 700

PR-STM (postreactivation short-term memory), 693–698, 700

Preattentive indices (FINSTs), 192

Precision grip, mirror neural system and, 626–638

Precognition period, neuronal circuitry of frontal lobe, 29

Predictive remapping, eye movements and, 517–518

Prefrontal cortex (PFC)

 in cognitive control development, 76–77, 82, 705–709, 714–719, 1019–1027

 comparative neuroimaging, 57–58

 development stages, 29–44

 in emotion regulation, 963–969

 in fluid reasoning development, 79–80

 modularity of language and, 1238

Prefrontal cortex (PFC) (continued)

 in relational reasoning, 1008–1015

 social cognition and, 956–957

 structural brain development, 73–74

 virus tracing studies, 557–558

Premotor areas, 555–556

Premotor cortex

 cascade model and, 1022

 goal-directed actions and, 1037–1039

Premotor theory of attention, 191

Preparatory responses, 914

Preplate (PP), cross-species comparisons of cortical development, 11

Presubplate (PSP), neuronal circuitry of frontal lobe, 30, 31, 32

Presupplementary motor area (PreSMA), virus tracing studies, 558

Primary motor cortex. See Motor cortex (M1)

Primates. See Monkeys; Neural populations in primate cortex

Prime order of thought (POT), explanatory gap and, 1114

PRIMER, 844

Priming

 attention and, 196, 197, 199

  negative, 196, 197

  partial spatial loss, 274–276

 conceptual, 715–719

 for early language acquisition, 840

 neural, 715, 717

Primordial plexiform layer, neuronal circuitry of frontal lobe, 29–31

Principle components analysis (PCA), 330–332

Principle of delayed estimating, 533

Principle of perceptual organization, 212–213, 317

Prisoner's dilemma game, 995

Procedural/declarative hypothesis, in morphological processing, 780–782

Processing, competence versus, 1241–1242

Programmed cell death (PCD), cross-species comparisons of cortical development, 16

Proliferative zones. See also Subventricular zone (SVZ); Ventricular zone (VZ)

 cross-species comparisons of cortical development, 14

 neuronal circuitry of frontal lobe, 34–35, 36, 42

Propositions, in syntactic processing, 805–806

Proprioception, 601, 604, 606

Proteases, in ocular dominance plasticity, 101

Protein kinase C (PKC), 116

Protein kinases, 111

Protein synthesis, in ocular dominance plasticity, 100–101

Protein-synthesis inhibitor, 698

Protomap hypothesis

 cross-species comparisons of cortical development, 18–19

 neuronal circuitry of frontal lobe, 30–31

Psychological refractory period, for attention, 194, 195

Psychopathology

 empathy and, 974, 979

 future-event simulation and, 753–754

 moral judgment and, 988

Psychopathy

 empathy and, 974, 979

 moral judgment and, 988, 993

Psychopathy Checklist, 993

Punishment, 967–968

Purdue Pegboard task, 149

Pure alexia, 794

Pure autonomic failure (PAF), empathy and, 977

Purkinje cells, 1140

Put, putamen, neuronal circuitry of frontal lobe, 31

Pylyshyn, Zenon, 1241–1245

Q

Qualia space (Q-space), 1212–1216

 defined, 1212

 giving shape to experience, 1212–1213

 translating phenomenology into geometry, 1214–1215

 viewing as shapes, 1213–1214

Quantum mechanics

 consciousness and, 1141

 SQUID (superconducting quantum interference device), 839

R

Radial domain, neocortical development, cross-species comparisons, 7, 9, 13, 14–15, 22, 23

Radial glia (RG)

 cross-species comparisons of cortical development, 7, 9, 13, 14–15, 22, 23

 neuronal circuitry of frontal lobe, 33

Radial wait hypothesis, cross-species comparisons of cortical development, 14–15

Ramón y Cajal, Santiago, 109, 129

Random-effects analysis, 742, 744, 745

Rape, 928

Rapid auditory processing, 168

Raven's Progressive Matrices (RPM), 78–81, 1008–1009, 1015

Reach adaptation, in motor learning and control, 589–590

Reaction times, video games and, 157

Reactions

 fear, neural basis for, 909–914

 nature of, 906

 in Pavlovian conditioning, 906–914

Reading ability, 175–176

Reading impairment, 166

Reading intervention, 174–176

Reading process, 789–800

 dorsal visual pathway, 794–799

  interfacing with verbal system, 798–799

  orientation of attention, 795–796

  parts of words, 797–798

  pathology, 795–796, 797, 798

  serial decoding, 797–798

  single word selection, 796–797

 pathology in, 792–798

 signed language, 169–170

 ventral visual pathway, 789–794

  early visual processing of printed words, 791–794

  interfacing with verbal system, 798–799

  pathology, 792, 794

  word perception as object perception, 789–792

Reafference, posterior parietal cortex (PPC) and, 600–601

Reagan, Ronald, 1260

Reappraisal, in emotion regulation, 964–966, 969

Receiver operating characteristics (ROC), 680–683

Receptive fields (RF)

 population properties, 422–423

 in primary visual cortex, 409–411

Recipient, in relational reasoning, 1008

Recollection, medial temporal lobe function, 680–683

Reconsolidation, 656, 691–700

 alternative interpretations, 696–698

 cognitive implications, 699–700

 consolidation theory, 692–693

 constraining, 695–696

 constraints on, 695–696

 reviving, 693–695

 systems, 698–699

Red/green color vision deficiency, 389–390

Reed, Randy, 324

Reflexes, nature of, 905

Regional selectivity, in Visual Word Form Area (VWFA), 792–794

Regionalization, in formation of visual pathway, 91–92

Relational complexity, 1008–1010, 1013–1014

Relational integration, 1006–1007, 1012–1013

Relational reasoning, 1005–1015

 component processes, 1006–1008

  interference control, 1006–1007, 1013–1014

  LISA model, 1007–1008, 1011, 1013, 1015

  relational integration, 1006–1007, 1012–1013

 prefrontal cortex (PFC) in, 1008–1015

  aging process, 1010–1011

  neuroimaging evidence, 1011–1015

  neuropsychological evidence, 1008–1011

  relational complexity, 1008–1010, 1013–1014

Relative entropy, 1204

Repetition suppression (RS) phenomenon, 647–648, 715–719

Repetitive transcranial magnetic stimulation (rTMS)

 morphological processing, 782–785

 motor cortex activity, 142–146, 148–149

Representation. See also Conceptual representation

 levels of, in learning and learning transfer, 159

 in phonological processing, 767–768

 in simple binary stimulus-choice paradigm, 1081

 syntactic processing, 805–807

 visual, consciousness and, 1112, 1113

Reproducible localization, in Visual Word Form Area (VWFA), 792

Repulsive bias, 531

Repulsive guidance molecule (RGM), 94

Response inhibition. See also Long-term depression (LTD)

 as cognitive control function, 76–77, 78

 conscious, 1194–1195

 movement release and, 568–573, 579

 nature of, 76–77, 78

Response selection

 as cognitive control function, 76–77, 78

 nature of, 76–77, 78

Response variability of population, 425–427

 additive versus multiplicative noise, 425

 spatial correlation, 425–426

 temporal correlation, 425–427

Reticular activating system, 1140

Retinal development, formation of eye-specific inputs, 67–71

Retinal ganglion cell (RGC)

 projections to dorsal lateral geniculate (dLGN), 67–71

 receptive fields in visual cortex, 410–411

 in rewiring vision into auditory pathway, 97

 statistical connectivity theory, 411–415

 targeting and retinotopic wiring, 92–94

Retinal Motion condition, 495

Retinal processing. See also Color vision

 lesion studies, 131–132

 neurodegenerative diseases, 131–132

 retinal waves in, 68, 70–71

 visual object recognition, 455

Retinitis pigmentosa, 389

Retinotopic processing, in early visual processing of printed words, 791–794

Retinotopic projections/maps, 91–102

 activity-dependent refinement of, 98–99

 of dorsal attention network, 223–226

 eye movements and, 520–521

 formation of visual pathway in early development, 91–95

  eye-specific domains, 94

  new maps, 94–95

  other feature maps, 94–95

  regionalization, 91–92

  retinotopic wiring, 92–94

  targeting, 92–94

 ocular dominance plasticity, 99–102

 rewiring vision into auditory pathway, 95–98

Retinotopy, surface perception and, 437–438, 442

Retrieval. See also Memory

 emotional modulation during, 731–733

 episodic, individual differences and, 743–747

 neural basis of, 743

Retrograde alteration, of synaptic plasticity, 114, 116

Retrograde amnesia, 684–685

Retronasal olfaction, 324

Retroviral gene transfer method, cross-species comparisons of cortical development, 9, 14–15

Reverse hierarchy theory (Hochstein and Ahissar), 194

Rewards

 in decision making, 1094–1095

 immediate and remote relevance of, 1026

 in learning process, 161, 588, 592–593

 in motor learning and control, 588, 592–593

 reward/salience signals in basal ganglia, 561, 571–572, 575

 reward/value signals in limbic system, 227–228

 in valuation process, 1087

Rhesus monkey. See Monkeys

Right visual field (RVF)

 in early visual processing of printed words, 791–793

 in semantic processing, 820

Rod monochromacy, 390–392

Rodents

 auditory cortex, rewiring vision into, 95–98

 basal ganglia function and, 575–577

 cross-species comparisons of mammalian cortical development, 7–23, 1138–1139

 infant, attachment learning, 890, 895

 learning rewarding nature of sensory states, 593

 memory, analysis of parahippocampal region, 662, 665, 666–671

 model-animal versus comparative approach and, 52–53

 olfactory cortex, 316, 329–330

 synaptic plasticity, 114–119, 122–123

 visual cortex

  formation of eye-specific inputs, 68, 70

  plasticity, 100–101

  visual pathway formation, 91–95

Rosch, Eleanor, 1031

Rostrolateral PFC (RLPFC), development of, 74, 79, 80–81, 707–709

Rule/task-set representation, as cognitive control function, 76

Rumelhart model, 1048–1051, 1055, 1059

Russell, Bertrand, 1116

Ryk receptor expression, 94

S

S cone mosaic

 Bayesian statistics and, 401–404

 described, 395

 functional consequences of, 384–386

 structural organization of, 384

Saccades. See Eye movements, saccades

Salience assignment, basal ganglia function and, 573–575

Sampling methods, 622

Scene parameters, in color vision, 396

Schaffer collateral pathway, 110, 111

Scharff, Constance, 879

Schizophrenia, 147

 basal ganglia function and, 571

 visual awareness and, 1156

Second-language learning, 169, 842, 848–849

Segment III of von Monakow, 36

Selection negativities, 238–240

Selection positivities, 238–240

Selective attention. See also Attentional processing, in selective attention

 auditory, 171–174

 in auditory informational masking, 345–348

 as cognitive control function, 76

 degree of competition, 186

 event-related potential (ERP), 186

 feature-based selection, 197–198

  in analysis of visual attention, 238–240

  eye movements in, 226–227

  feature integration theory, 197–198, 208–210, 226–227, 276–277

 nature of, 76, 185

 neuroimaging studies

  selection among multiple competing objects, 210–214

  units of selection, 206–210

 through neuronal synchronization, 289–299

  attentional processing, 293–298

  attentional selection in neuronal communication structure, 290–292

  interneuron networks and attentional modulation, 292–293

  selective synchronization, 292

 object selection

  attributes, 191–192

  among multiple competing objects, 210–214

  nature of object-based attention, 208–209

  physiological mechanisms, 229–230

  spatiotemporal analysis, 240–246

 plasticity and, 170–171

 selectivity of visual neurons, 284–285

 spatial selection, 191–192, 206–208

  focus of attention, 235–237

  locus of attention in visual system, 237–238

  spatiotemporal analysis, 235–238

  visual search, 238

 visual. See Visual attention

Selective Tuning Model, 236

Self-awareness

 self-knowing, 752

 in social cognition, 954–955

Self-consciousness, 1141–1142

Self-projection, 757–758

Self-regulation, in social cognition, 956–957

Semantic aphasia, 1063–1064

Semantic cognition, 1047–1064

 neural basis of, 1061–1064

 object concepts and, 1040–1041

 parallel distributed processing (PDP) and, 1047–1053

  modeling semantic dementia, 1054–1057, 1059

  overgeneralization, 1048, 1051–1052, 1059

  sensitivity to coherent correlation, 1052–1053

 Rumelhart model, 1048–1051, 1055, 1059

 in semantic aphasia, 1063–1064

 in semantic dementia, 1008, 1047, 1053–1061

Semantic dementia, 1008, 1047, 1053–1061

 characteristics of, 1054

 development versus disintegration and, 1057–1059

 knowledge of both objects and words, 1060–1061

 modeling, 1054–1057

 nonsemantic deficits in, 1059–1060

 role of anterior temporal lobes (ATL) in semantic memory, 1062–1063

Semantic facilitation index (SFI), 1010

Semantic memory

 loss of, 79

 object concepts and, 1033, 1035

 role of anterior temporal lobes (ATL) in, 1062–1063

Semantic processing, 169, 170

 in action semantics, 648–650

 central feature, 875

 challenge of, 879–880

 interactions between control and memory, 713–714

 in relational reasoning, 1007–1008

 semantic unification, 819–833, 1062–1063

  beyond sentence level, 828–832

  functional characteristics, 820–827

  integration versus unification, 832

  MUC (memory, unification, control) framework, 819

  multimodal nature, 828

Sensitive periods. See Critical (sensitive) periods

Sensitivity to spacing changes, 468

Sensorimotor control, 603–607, 770, 1021

Sensory processing. See also Auditory processing; Multisensory integration; Olfaction; Visual processing

 attention and strength of response, 283–284

 emotional impact on, 727–728

 motor processing compared with, 613–622

  algorithms for learning and online computation, 621–622

  Bayesian inference, 614–622

  inference versus control, 613–614

  intermediate representations, 619–621

  optimal control, 614–619

 neuronal circuitry of frontal lobe, 42

 object concepts, 1034–1035

 optimality in, 615–617

Sensory substitution

 audition for vision, 167–169, 321

 in blindness, 321

Sentence processing

 in early language acquisition, 844–845

 interpretation, 812, 813

 semantic unification beyond sentence level, 828–832

Sentience, 1138–1139

Sequencing of candidate genes, nature of, 856

Sequential finger movement task, 149

Serial behavior, hierarchical processing, 641–642

Serial decoding

 in conditioned fear reactions, 911–913, 914

 in reading process, 797

Serial reaction time (SRT), basal ganglia function and, 576, 577

Serotonin, 1140

Serotonin transporter (5-HTTI), in imaging genetics studies, 947

Short-term memory (STM). See Working memory

Sign rule of connectivity, 412

Signal detection theory, 134, 503–505

 recognition memory, 680–683

Signal-to-noise ratio, 285–286, 310, 345, 363

Signaling centers, in formation of visual pathway, 91–92

Signed language, 169–170

Silent meaning, in semantic unification framework, 824

Simple binary stimulus choice, 1076–1077, 1079–1083

Simulation studies

 future event simulation, 752–754, 757–759

 in integrated information theory (IIT), 1207–1209

 of perceptual filling-in, 443–447

Simulation theory, 1185

Single word selection, in reading process, 796–797

Size of cerebral cortex, cross-species comparisons of cortical development, 15–17

Skin conductance response (SCR), autonomic response to nonconscious emotion, 1186–1187

Skinner, B. F., 837

Skinner box, 1075, 1077

Sleep

 consciousness during, 1139, 1141, 1209

 in memory consolidation, 730–731

Slow activity transients (SAT), 35

Smell. See Olfaction

SMI-32 (NPNF), 55, 56, 57

Smid, John Maynard, 876

Smith, G. Elliot, 315–316

SOAR, 159

Social cognition, 953–959, 1258. See also Empathy

 components of, 954–958

  detection of threat, 957–958

  mentalizing, 954, 955–956

  self-awareness, 954–955

  self-regulation, 956–957

 emotion and, 1184–1185. See also Emotion

 nature of, 953–954

 “special” nature of social cognition, 958

Socioeconomic factors

 intervention style and, 176

 IQ and, 80, 171

Sociopathy, moral judgment and, 988

Somatic marker hypothesis, 1098

Somatic markers, 977

Somatosensory cortex

 neuronal circuitry of frontal lobe, 35

 in perceptual learning, 132–133

Somatostatin, 35

Source amnesia, 1118

Space-time tuning function (STTF), 604–607

Spatial attention

 comparison of effects across visual system, 208, 1156–1157

 deficits in

  complete loss, 270–273

  loss of perceptual space, 269–273

  partial loss, 273–277

  types of deficits, 269–270

 implicit spatial maps, 272–273

 locus of spatial selection, 237–238

 orientation in reading process, 795–796

 profile of spatial focus of attention, 235–237

 role of spatial selection in visual search, 238

 spatial neglect versus, 259, 263–264

 spatial selection and

  behavioral coherence, 191–192

  spatiotemporal analysis, 235–238

  units of selection, 206–208

 in spatiotemporal analysis of visual attention, 235–238

Spatial correlations, in population response, 425–426

Spatial dyslexia, 798

Spatial encoding, in odor discrimination, 327–329

Spatial neglect, 259, 263–264, 265

Spatial orientation

 cortical areas in, 259

 perisylvian neural network, 259–266

  role in human right hemisphere, 263

  spatial neglect as disconnection syndrome, 263–264

  white matter connectivity, 260–262

Spatial tasks, auditory learning in, 359–362

Spatiotopic maps, 520–521

Species-typical behaviors, 906

Specific language impairment (SLI), 168, 171, 172, 174, 859–860, 863, 864

Specificity

 of consciousness, 1209–1212

 of input in memory formation, 113, 114

 of learning, 153–156

Speech arrest, 260

Speech production

 mechanisms underlying, 878

 motor-speech systems in, 771–773

 neuronal circuitry of frontal lobe, 41

 perceptual theory of, 773

 posterior language cortex in, 770

Speech recognition

 informational masking and, 348–351

 motor theory of speech perception, 883

 phonological processing

  bilateral/asymmetric nature of, 769–770

  bilateral organization, 768–769

Speech segmentation, 169

Speech sound disorder (SSD), 860, 863, 864

Spindle cells, in human brain specialization, 54–55

Spinogenesis

 first phase, 37

 neuronal circuitry of frontal lobe, 37, 41, 42

Spinoza, Baruch, 1183

Split-brain procedures

 modular hypothesis and, 1247–1249

 word recognition and, 768

Spors, Hartwig, 329

Sprague effect, 1070–1071

Spreading activation

 anatomical basis for, 437–438

 defined, 436

 early visual system, 437–438

SQUID (superconducting quantum interference device), 839

Stanford Binet IQ, 154–155

Starburst amacrine cells, 69

State-dependent learning, 137

State estimation

 in motor learning and control, 588, 594

 posterior parietal cortex (PPC), 594, 599–609

  dynamic, 606–609

  movement intention and anticipation, 599–601

  neural correlates, 604–607

  for online control, 601–603

  sensorimotor control, 603–607

Steady-state visual-evoked potential (SSVEP), 236, 239, 240

Sternberg, Robert J., 78

Stimulus-independent thoughts (SITs), 1070

Stimulus-response (S-R) learning

 basal ganglia function and, 575–577

 fear in, 906–909

 habits and, 906

Stimulus-stimulus (S-S), 906–909

STRAIGHT algorithm, in auditory object analysis, 370

Streaming, in auditory object analysis, 370–371

Stress hyporesponsive period (SHRP), 893

Striatum

 effects of damage, 593–594

 overview, 1094–1095

 valuation in decision making, 1097

Strictly congruent, 628–629

Striosomal pathway, in basal ganglia function, 569

Stroke

 aphasia following, 259–260, 810

 Balint's syndrome following, 198

 forebrain dysfunction following severe brain injury, 1129

 impact of, 144

 language processing after, 1238

 neurodegenerative disease resulting from, 132

 recovery of hand motor function, 148–149

 white matter structural changes following, 1128

Strong-loops hypothesis (Crick and Koch), 1170

Stroop task, 156, 185, 192–193, 199, 707, 928, 931, 963, 969, 1024, 1025

Structural magnetic resonance imaging (MRI), of age-related change in cortical thickness, 73–74

Structural neuroimaging, comparative, 55–58

Structural organization of brain, neuronal circuitry of frontal lobe, 29–34, 36, 37, 39, 41

Subjective reports, in measuring visual awareness, 1151

Subpial granular layer (SG), cross-species comparisons of cortical development, 11, 22

Subplate in formation (SPF), neuronal circuitry of frontal lobe, 31–34

Subplate intermediate zone (SP/IZ), cross-species comparisons of cortical development, 11

Subplate zone (SP)

 cross-species comparisons of cortical development, 10, 11, 13, 18, 21

 neuronal circuitry of frontal lobe, 35–36, 37, 38, 39–40, 43

Subplate zone (SZ), neuronal circuitry of frontal lobe, 30, 31, 33, 35

Subsidiarity, 1021

Substantia nigra (SN)

 basal ganglia function, 569–571

 virus tracing studies, 553–558, 567–568

Subthalamic nucleus (STN), basal ganglia function, 569–571

Subtraction paradigm, 1257

Subventricular zone (SVZ)

 cross-species comparisons of cortical development, 9, 11, 14, 20, 21, 22

 neuronal circuitry of frontal lobe, 31, 32–33, 34–35, 36

Superior frontal gyrus (SFG), mirror neural system and, 634

Superior frontal sulcus (SFS), in visuospatial working memory, 74

Superior longitudinal fasciculus (SLF), dense perisylvian white matter connectivity, 260–264

Superior/middle temporal gyrus (STG/MTG)

 dense perisylvian white matter connectivity, 260, 263

 grammar processing and, 1236–1237

 in phonological processing

  speech production, 770

  spoken word recognition, 768–769

 in semantic unification network, 828–832

Superior occipitofrontal fasciculus (SOF), dense perisylvian white matter connectivity, 261, 264

Superior temporal sulcus (STS)

 grammar processing and, 1236–1237

 moral judgment and, 988, 991

 object concepts and, 1034–1040

 in phonological processing

  critical role, 769

  spoken word recognition, 768–769

  working memory in auditory-motor integration networks, 769

 in semantic unification network, 828

Supplementary motor area (SMA), 142, 143, 555–556

 action understanding, 647

 anatomical versus representational hierarchy, 643–644

 in decision making, 1025–1026

 goal representation in bimanual coordination, 646

 spontaneous motor initiation, 1191

Surface perception, 435–449

 active interpolation theory

  described, 435

  evidence for, 439–442

  features of early visual system, 437–439

 adaptation, defined, 436–437

 contour in, 133–134, 135, 136

 experimental paradigms for, 436

 filling-in research

  assumptions and insights, 447–449

  computational model for, 442–447

  definition of perceptual filling-in, 436–437

  future directions, 449

  limitations, 449

  simulation studies, 443–447

 problem of, 435–437

 simulation studies, 443–447

 texture in, 135, 153, 443–447

  model for texture filling-in, 442–447

 theoretical background, 435–437

Surface-related spreading activation, 438

Surface segmentation, 131

Surprise, facial expression and amygdala response, 936–939

Syllable discrimination, in phonological processing, 768

Sylvian fissure, 186, 263–264

Symbolic encoding theory, 436

Symmetry of perception, cortical, 316–318

Synaptic connections

 cross-species comparisons of neocortical development, 7, 19–20, 22

 neuronal circuitry of frontal lobe, 35

 plasticity of. See Synaptic plasticity

Synaptic plasticity, 109–123

 attractor dynamics in neural networks, 121–123

 complementary mechanisms in control of, 146–147

 long-term depression (LTD) of cellular mechanisms, 109–123

 long-term potentiation (LTP) of cellular mechanisms, 109–123

 modifications as means for memory, 109–111

Synaptic tagging, 114

Synaptogenesis

 cross-species comparisons of cortical development, 22

 neuronal circuitry of frontal lobe, 35, 37, 40–41, 42

Synchronization of neurons. See Selective attention, through neuronal synchronization

Synergies. See Muscle synergies

Syntactic processing, 169

 deficits in, 807–814

 lesion studies, 807–813

 mediating role of syntax, 880

 neuroimaging studies, 810–813, 845

 syntactic representations and processing, 805–807, 845

 syntactic structures, 805–806

 syntax-semantics framework, 824–827

System identification, in motor learning and control, 588

T

Tabula rasa hypothesis, in cross-species comparisons of cortical development, 18

Task dependence, in phonological processing, 767–768

Task difficulty, in learning and learning transfer, 159–160

Task sets, working memory and, 228–229

Task-specific deactivations, 1068

Task-switching, as cognitive control function, 76

Telencephalic pallium, neuronal circuitry of frontal lobe, 30

Telencephalon, cross-species comparisons of neocortical development, 8–9, 10

Temporal decoding, of neural population responses, 428–429

Temporal difference model, in valuation process, 1087–1088

Temporal encoding

 in odor discrimination, 329–330

 in perceptual learning, 135–136

Temporal encoding function (TEF), 604–605

Temporal expectancies, selective neuronal synchronization and, 296–297

Temporal tasks, auditory learning in, 358–359

 relative-timing tasks, 359, 360

 temporal-interval discrimination, 358–359

Temporal word form area, 1153

Temporoparietal junction (TPJ)

 moral judgment and, 988–989, 991, 993–994

 perisylvian network for spatial orienting, 259–260

 social cognition and, 955

Tetris (video game), 159

Texture determination, 135, 153

 computational model for texture filling-in, 442–447

 simulation studies in, 443–447

Thalamic neurons

 central thalamic deep-brain stimulation, 1131–1134

 in forebrain dysfunction following severe brain injury, 1128–1130

Thalamic radiation (TR), cross-species comparisons of cortical development, 13

Thalamocortical fibers, neuronal circuitry of frontal lobe, 32–33, 37–39, 43

Thalamus

 in cognitive function, 565, 567

 neuronal circuitry of frontal lobe, 31, 32, 35–36

 receptive fields in primary visual cortex, 409–411

 transfer of information to auditory cortex, 95

 transfer of information to visual cortex, 91, 92

THBS4 (thrombospondin 4), 60

Theories of competence, 1241

Theories of processing, 1241

Theory of mind (TOM), 41, 758, 880, 954, 1042

Thorndike, E. L., 739

Thought experiments, 1115, 1202–1203, 1211–1212

Threat detection, 957–958

Three-dimensional structural coding hypothesis, 460–463

Three-dimensional surface orientation, 488–489

Tics, 572

Time

 in perceptual learning, 135–136

 synaptic plasticity and, 122–123

Time-dependent behavioral impairment, 694–695

Tinnitus, 147

Todorov, E., 549

Token Test, 809

Tonically active neurons (TANs), basal ganglia function and, 574–575

Top-down influences. See also Cognitive (executive) control

 in consciousness, 1195–1197

 in learning process, 134, 136–137

 in selective attention, 186–187, 211–212, 213–214, 219, 220

  causality of biases, 223, 224, 230

  physiological mechanisms for, 229–230

  relation to bottom-up influences, 213–214

  selective neuronal synchronization, 289–299

Topic maps, 1230–1233

Topographic projections/maps

 of dorsal attention network, 223–226

 inherited color vision deficiencies, 388–392

 retinotopic, 91–102, 223–226

Tourette syndrome, 82

 basal ganglia function and, 568, 571, 572

TRACE, 768

Trace deletion hypothesis, 808

Training

 attention training for children, 173–175, 176

 auditory

  characteristics of auditory processing in perceptual-learning patterns, 358–362

  generalizations, 355–357, 360

  neural processes related to auditory tasks, 353–358

 inhibitory avoidance, 116

 parent, 176

 plasticity related to, 153–161

  complex learning environments, 156–158

  determinants of learning and learning transfer, 158–161

  impact of practice, 154–156

  specificity of learning, 153–154

 training-related plasticity, 153–161

  complex learning environments, 156–158

  determinants of learning and learning transfer, 158–161

  impact of practice, 154–156

  specificity of learning, 153–154

Transcranial direct current stimulation (tDCS), 149

Transcranial magnetic stimulation (TMS)

 of emotion regulation, 967, 970

 empathy and, 975, 977, 982

 functional role of perisylvian network, 263

 goal representation and, 644–645

 in methodology of cognitive neuroscience, 1256, 1259

 posterior parietal cortex (PPC) function, 601, 603

 role of attention in feature binding, 198

 in semantic memory processing, 1062

 spontaneous motor initiation, 1193–1194

 vision pathologies, 1158–1159

Transient circuitry, neuronal circuitry of frontal lobe, 29, 32, 34, 38

Transient embryonic zones, cross-species comparisons of cortical development, 9–14

Transient form of paralysis, 1141

Tritanopia, 388–389

Tritiated thymidine, as marker for DNA synthesis, 8

Trolley problem, 991, 994

Troxler fading paradigm, 439, 440–441

Tryptophan hydroxylase-2 (TPH2), in imaging genetics studies, 948

Tulving, Endel, 655, 743, 752

Twin studies

 genetic basis of emotional variability, 946

 language impairment, 856, 863

Typically developing (TD) children, 171, 172, 174

U

Ultimatum Game (UG), 966–967, 994

Uncertainty

 interactions between control and memory, 713–714

 reduced, 715–719

Unconditioned stimulus (US), in decision making, 1095–1096

Unconscious vision, 1152–1155

Unification, in semantic unification framework, 819. See also Semantic processing, semantic unification

Unit recording experiments, 305–306

Useful Field of View Task, 157–158

Utilitarian judgment, moral judgment and, 991–992

V

Variance maps, 744, 745

Vegetative state (VS), 1124

Ventral frontoparietal attention network. See Frontoparietal attention network, ventral

Ventral intraparietal area (VIP), optic flow in primates and, 502–503

Ventral premotor area (PMv), 555–556

Ventral visual pathway, 789–794, 798–799

 reading process and

  interfacing with verbal system, 798–799

  pathology, 792, 794

 visual awareness and, 1159–1160

Ventricular zone (VZ)

 cross-species comparisons of cortical development, 9, 11, 13, 14, 16, 17, 18, 20, 21, 22

 neuronal circuitry of frontal lobe, 31, 33, 34–35, 36

Ventrolateral prefrontal cortex (VLPFC)

 development of, 74, 79, 81, 705, 706, 707, 709–714, 714

 in emotion regulation, 963

 memory and, 705, 706, 707, 709–720, 714, 932

 in processing of emotional information, 932

Ventromedial prefrontal cortex (VMPFC), moral judgment and, 987–990, 992, 994

Vernier acuity tasks, 159

Vernier discrimination, 136–137

Vestibular signals

 perception of heading from, 500–502

 primate cortical neuron response to, 502–503

Video games

 aggressive behavior and, 155

 in complex learning environments, 157–158

 dopamine release and, 161

 generalized learning and, 160

 mental rotation and, 157, 159

Violence, moral judgment and, 991

Virtual brain damage, 1005

Virus tracing studies, 554–561, 567–568

Visual analogy problems, 80

Visual attention. See also Visual awareness

 attentional control processes, 251–257

  brain networks for conflict processing, 253–255

  conflict and, 252–253

 consciousness versus, 199–200, 1141–1143

 deficits in, 269–277

  complete, 270–273

  loss of perceptual space, 269–270

  partial, 273–277

 effect on visual neurons, 281–286

  attentional bottleneck, 282–283

  attentional modulation of neuronal responses, 285–286

  selectivity of visual neurons, 284–285

  strength of sensory responses, 283–284

 feedback in, 1165–1175

  anatomical observations, 1165–1166

  binocular rivalry role in, 1170–1176

  physiological observations, 1166–1168

  role of feedback in attention, 1168–1170

  visual masking role, 1170–1176

 flash suppression, 1142, 1144, 1145, 1154

 frontoparietal attention network and, 219–230

  anticipatory signals, 219–223

  coding locus of attention, 224–226

  eye movements and feature-based selection, 226–227

  functional connectivity, 219–223

  prefrontal-cingular circuits, 228–229

  reward/value signals and limbic system, 227–228

  task sets, 228–229

  top-down biases, 223

  topographic organization of maps, 223–224

  working memory, 228–229

 neural processing of emotional information, 925–926

 in reading process

  parts of words, 797–798

  pathology, 797

  serial decoding, 797–798

 selective, 157–158, 205–214. See also Selective attention

Visual awareness, 1151–1161

 brain activity and, 1152

 characterizing unconscious homunculus, 1152–1154

 empirical ad theoretical integration, 1159–1160

 feedback in, 1165–1175

  anatomical observations, 1165–1166

  binocular rivalry role in, 1170–1176

  physiological observations, 1166–1168

  role of feedback in attention, 1168–1170

  visual masking role, 1170–1176

 impact of, 1155–1158

 measuring, 1151–1152

 pathology, 1158–1159

 unconscious vision and multivariate pattern analysis, 1154–1155

Visual cortex. See also Visual neurons; Visual processing

 anatomy of feedback in, 1165–1166

 attention and. See also Visual awareness

  spatial attention, 206–208

 comparative neuroimaging, 57–58

 consciousness and

  biological theory, 1112–1113

  visual awareness, 1155–1158

 cross-species comparisons of cortical development, 10, 19–20, 55, 57–58

 feedback in, physiology, 1167–1168

 formation of eye-specific connections, 67–71

  binocular vision, 68, 70, 99–102, 130–131

  inputs to dLGN, 68–70, 94

  ocular dominance columns, 67–68

  role of retinal waves, 68, 70–71

 grandmother cells, 309–319

  correlation, 316–318

  cortical function, 314–316

  defined, 310

  history, 309–314

  invariance, 316–318

  symmetry, 316–318

 hierarchical function, 314–316

 impact of visual deprivation on auditory development, 167–169

 object recognition, 455–465

  discriminative learning, 133–134

  network processing of boundary fragments, 463–464

  object classification, 159

  retinal signals, 455

  three-dimensional surface fragments, 460–463

  two-dimensional object boundaries, 455–460

 in perceptual learning, 132

 plasticity, 129–137, 166–167

  lesions and, 131–132

  neuronal activity in formation of eye-specific connections, 67–71

  ocular dominance plasticity, 91, 99–102

  perceptual learning and, 132–136

  postnatal development, 129–131

  top-down influences, 134, 136–137

 statistical connectivity theory, 411–415

  cortical maps and, 413–414

  described, 411–413

  testing, 414–415

 subvoxel specialization of, 448

 visual abilities and video games, 157

 visual pathway, 91–102

  activity-dependent refinement of visual maps, 98–99

  early development, 91–95

  ocular dominance plasticity, 99–102

  retinotopic projections/maps, 91–102

  rewiring vision into auditory pathway, 95–98, 131, 166–167

  in word reading, 789–800

 wiring of functional maps, 409–411

 wiring of receptive fields, 409–411

Visual extinction, 1159

Visual information, 321

Visual masking, 1170–1176

Visual neglect, 1159

Visual neurons. See also Visual awareness; Visual cortex; Visual processing

 effect of visual attention on, 281–286. See also Visual awareness

  attentional bottleneck, 282–283

  attentional modulation of neuronal responses, 285–286

Visual neurons. (continued)

  selectivity of visual neurons, 284–285

  strength of sensory responses, 283–284

  timing of neural activity, 1155

 selective synchronization of, 289–299

  attention selection in neuronal communication structure, 290–292

  selective attention through selective synchronization, 292

  selective inter-areal synchronization, 298–299

  selective modulation of synchronization, 293–298

  synchronization in interneuron networks, 292–293

Visual processing. See also Color vision; Surface perception

 learning versus perception, 675

 memory impairment and, 675–678

 for perceiving objects, 1032–1042

Visual representations. See also Object recognition

 phonological impact on, 799

 word perception as object perception, 789–792

Visual stimuli, speech-related, 771

Visual Word Form Area (VWFA), 792–795, 798, 799, 800

Visuomotor coordination task, 149

Visuospatial working memory, development of, 74–75

Vocabulary development

 early visual processing of printed words, 791–794

 neural signatures of word learning, 842–843

 spoken word recognition, 768–769

Vocal learning. See also Speech production; Speech recognition

 mechanisms underlying, 878

Volition. See Consciousness, volition and function of

Volleyball, complex learning environments, 156–157

Voltage-gated (N-type) receptors/channels, cross-species comparisons of cortical development, 15

Voltage-sensitive dye imaging (VSDI), visual cortex, 419–423, 425–432

Voluntary actions. See Consciousness

Voluntary motor control. See Motor processing

Von Economo neurons, in human brain specialization, 54–55

Voronoi analysis, 388–389

VWFA (Visual Word Form Area), 792–795, 798, 799, 800

Vygotsky, Lev, 161

W

Wada procedures, word recognition and, 768

Wallis, Terry, 1127–1128

Water polo, complex learning environments, 156–157

Wechsler Intelligence Scale for Children (WISC-III), 156

Wernicke, Carl, 1235

Wernicke-Geschwind model, 741

Wernicke's area

 comparative neuroimaging, 57

 connectivity studies, 261

 in human brain specialization, 53, 54

 spoken word recognition and, 768

Wernicke's language model, 773

Western Aphasia Battery, 809

White matter (WM). See also Gray matter

 in cognitive control development, 76

 comparative neuroimaging, 55–58

 neuronal circuitry of frontal lobe, 31, 37

 perisylvian white matter connectivity, 260–262

 and plasticity of human neurocognition, 165

 structural changes following brain injury, 1127–1128

Whitening, 427, 428

Wiesel, Torsten, 309, 311–312, 314, 409

Williams syndrome, 166

Wilson, Eric, 961

Win-shift behavior, 575

Word reading. See Reading process

Working memory

 auditory-motor integration networks in, 771

 consolidation theory and, 692–695

 in decision making, 1021

 defined, 678

 development of, 74–76, 82

  anatomical perspectives, 566

  manipulation of information in, 75–76

  nonspatial working memory, 75

  visuospatial working memory, 74–75

 lesion studies of medial temporal lobe function, 678–679

 long-term memory versus, 683

 nature of, 73

 path integration and, 683–684

 in visual selection process, neuroimaging studies of, 228–229

World knowledge, in semantic unification framework, 822

Writing, striatal damage and, 593–594

X

X-linked recessive traits, 388–389, 390

Y

Yerkes-Dodson law, 161

Z

Zombie behaviors, 1145–1146, 1155

Zone of proximal development (Vygotsky), 161

 


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